Pairwise Alignments

Query, 491 a.a., Sensor histidine kinase RcsC from Xanthobacter sp. DMC5

Subject, 736 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

 Score =  140 bits (353), Expect = 2e-37
 Identities = 94/292 (32%), Positives = 160/292 (54%), Gaps = 21/292 (7%)

Query: 181 PSFLTAEARCRAMRGGMVRVSWRAPWQQAQTEQMKAERQKADAAARARAEAEAANAAKSR 240
           P  L A+    +  G ++ + +++  Q      +    QK       + +A+A+  AKS 
Sbjct: 302 PIVLIAKKVSESREGEIIDIRYKS--QDEIRHLIDTFNQKTIYLEAEKVKAQASTKAKSA 359

Query: 241 FLAAMSHELRTPLNAILGFSELLATQTGAPLDDARKADYARIIHESGQHLLGLVNDILDL 300
           FLA +SHE+RTP+N +LG +++L          +++  +   ++ESG+H++ L+N+ILD 
Sbjct: 360 FLATLSHEIRTPMNGVLGTAQILLKDELT----SKQRQHLTSLYESGEHMMSLLNEILDY 415

Query: 301 SRVEAGAYVLEREAVDVGALVAGCAEMVALDAERTGVSVKTKVPARLPVLD-----ADKR 355
           S++E G + L+  A  + +++     + +      G+    K      + D      DK 
Sbjct: 416 SKIEQGKFELDHSAFPLKSIIGSIKSIYSSLCVEKGL----KFQLNSEITDGRWYYGDKA 471

Query: 356 ALRQIVLNLLSNAVKFTPAGGRVQVGVRMQG-DE---LIIRVRDTGPGMRPEDVARLGEP 411
            LRQI+ NLLSNAVKFT A G V +G+  +  DE   LII+V+DTG G+  E + R+  P
Sbjct: 472 RLRQIIFNLLSNAVKFTEA-GFVAIGLSEESCDEENYLIIKVQDTGIGIAQESLGRIFRP 530

Query: 412 FFQA-GDCIQKSRGSGLGIAVVKGLVKLHDGDVRVESALGRGTSVSVSLPVA 462
           F QA     ++  G+GLG+A+VK + +L +G V V+S +G+G+   V + +A
Sbjct: 531 FEQAESHTTRRFGGTGLGLAIVKQIAELMNGTVLVQSEVGQGSCFKVRVKLA 582