Pairwise Alignments

Query, 346 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 235 a.a., GntR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 60.1 bits (144), Expect = 5e-14
 Identities = 54/195 (27%), Positives = 87/195 (44%), Gaps = 6/195 (3%)

Query: 129 VEQEVVSRTALGAFRVVENHLAAYYGVSRTVAREVLSRLNQRGVLRKDSRLHWYAPALTP 188
           +E  V  + A G+ ++ E  LA  + VSR   RE L R+   G++ +   +      L+P
Sbjct: 28  IEAIVEGQLAPGS-KISEPELAKQFQVSRGPLREALMRVEGLGLIERIPHIGARVIQLSP 86

Query: 189 AYVAELFEMRAILEPAALRLAFPRLAPGQVATLLANLRDAAAHPDAVDGARLGALEN--E 246
             + EL+ +R  LE  A RLA   +   ++A L + L   + H D V+GA     +   +
Sbjct: 87  TKLVELYAVREALEGMAARLAARNITEIELAGLESLLSTHSTHIDQVEGASYFHQQGDFD 146

Query: 247 LHVGLLGRCGNATLMEALATCQTLLVALTFLYVRSPQPHGRE-PFIAEHLDVAERLAAAD 305
            H  ++  C N  L+  L  C  L   L     +SP+ H R    + EH  +   +   D
Sbjct: 147 FHYRIIQACRNQQLIGLL--CDELYHLLRMYRYQSPRSHSRPVEALEEHKFILRAIRQRD 204

Query: 306 VEGAADALRDHLRGS 320
            E A   +R H+  S
Sbjct: 205 EELAEMLMRRHISRS 219



 Score = 50.1 bits (118), Expect = 6e-11
 Identities = 25/65 (38%), Positives = 39/65 (60%)

Query: 33 ERAFDILASQIASGALAPGERLLESRVAERFGISRAPARQALARLERVGLVSRSDGHGFQ 92
          E   + L   I  G LAPG ++ E  +A++F +SR P R+AL R+E +GL+ R    G +
Sbjct: 21 ENLTEYLIEAIVEGQLAPGSKISEPELAKQFQVSRGPLREALMRVEGLGLIERIPHIGAR 80

Query: 93 VMPLA 97
          V+ L+
Sbjct: 81 VIQLS 85