Pairwise Alignments

Query, 293 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

Subject, 306 a.a., putative branched-chain amino acid transport system, permease component from Phaeobacter inhibens DSM 17395

 Score =  170 bits (431), Expect = 3e-47
 Identities = 103/301 (34%), Positives = 163/301 (54%), Gaps = 31/301 (10%)

Query: 15  QLLLGLINGAFYAMLSLGLAVIFGLLNVINFTHGAQYMMGAFGAWMLLNYAGIPFWGALV 74
           Q+L GL  G    +++ GL ++FG++ +IN  HGA YM+GAF A ++  + G  F  AL+
Sbjct: 9   QILNGLQFGVMLFLMAAGLTLVFGVMGLINLAHGALYMVGAFAAAVVAAWTG-SFVLALM 67

Query: 75  LSPIVVAIIGMVIERTLLKRLYHLDHLYGLLLTFGLALILEGLFRRQYGSSGLPYNNP-- 132
            S    A  G ++E  ++++LY  DHL  +L TF L LI     R  +GS  L  + P  
Sbjct: 68  ASLAAAAAAGALVEFLVIRKLYDRDHLDQVLATFALILIFSEGTRWVFGSFPLFLDVPSY 127

Query: 133 ------LPGGTNLGFMFLPNYRAFVVVASLVVCLATWFVIERTKLGSYLRAATERPDLVQ 186
                 LPGG        P YR  ++   LVV    +++I RT++G  +RA     +++ 
Sbjct: 128 LSGPISLPGGIEY-----PLYRLTIIAIGLVVAAGLFWLIARTRIGIQIRAGESDREMIA 182

Query: 187 AFGIDVPRMITLTYGFGVGLAALAGVLAAPAYQVSPTMGSNLIIVVFAVVVIGGMGSIMG 246
           A G+D+ ++ TL +  G  LA LAG L      V   MG  ++I+ F V+VIGG+GSI G
Sbjct: 183 ALGVDISKLYTLVFALGAALAGLAGALVGAIQSVQVGMGEPVLILAFVVIVIGGIGSIKG 242

Query: 247 AIVTGFGLGVIEGLTKVFYPE-----------------ASSTVIFVIMAIVLMVKPAGLF 289
           A+V    +G+ + L  VF P+                  +S +I+++MA++L+V+P+GL+
Sbjct: 243 AMVGALLVGLTDTLGGVFLPQMFALFMEPASATSVGASLASMLIYILMAVILLVRPSGLY 302

Query: 290 G 290
           G
Sbjct: 303 G 303