Pairwise Alignments

Query, 381 a.a., Inner membrane protein YdcO from Xanthobacter sp. DMC5

Subject, 401 a.a., benzoate transporter from Pseudomonas stutzeri RCH2

 Score =  279 bits (714), Expect = 9e-80
 Identities = 149/370 (40%), Positives = 221/370 (59%), Gaps = 1/370 (0%)

Query: 3   VSAIVSAFVAALVGFGGTLALILSAAAAVGASPAQASSWVAALCLAVAGSSAFLSIRHRL 62
           +SA+V+ F+A ++ + G L +I  AA A        SSWV  + +        LS+R+++
Sbjct: 10  LSAVVAGFIATVISYAGPLVIIFQAAKAGNMPHDILSSWVWTISIGSGVLGILLSLRYKV 69

Query: 63  PIITAWSTPGAALLAAFGAGIGMERAAGAFLVAGLLMVACAAVKPLGTLVARIPVAVAAA 122
           PII AWS PG+ALL      I +  A GA++V  ++++          ++ R+P A+AA 
Sbjct: 70  PIIIAWSAPGSALLVTMLPDITLNEAIGAYIVTSVVVLLVGLSGAFDRIINRLPSAIAAG 129

Query: 123 MLAGVLVRFVTALAEHAVKSPALVLPVVAAFFLTRRLAPSWSVPAALVAGIAAALGLGAV 182
           MLAG+L RF T L     + P LVL +   + + +R  P ++V A LV G+   +  G +
Sbjct: 130 MLAGILFRFGTGLFVSIKEQPWLVLAMFCTYLIFKRAMPRYAVLAVLVVGVTITIASGEL 189

Query: 183 -GPMPAPELSALVWVTPEFDSGVLISIALPLFLVTMASQNLPGFAVLTASGYVPPVRSIL 241
                   L+  VW+ PEF   V+++IA PL +V +  Q +PG AVL  +GY  P   ++
Sbjct: 190 RSEALVIGLATPVWINPEFSWQVMLNIAFPLIMVALTGQFVPGMAVLRNAGYSTPASPLI 249

Query: 242 ATTGIASVLTAPFGAHASNLAAITAALCTGPDCDPDPRARWKAGPVYALFYLLLAAAGAS 301
           +++ + S+L APFG H  NLAAITAA+CTG +   +P  R+ AG    +FYLLL   GA+
Sbjct: 250 SSSALGSLLLAPFGCHGLNLAAITAAICTGREAHENPAKRYVAGVSGGVFYLLLGIFGAT 309

Query: 302 LVAVFAALPPALVATIAGLALIAPLTGSLTAALNVDKDRTAAIVTFATTASGISALGLGA 361
           LV++F A P AL+A +AGLAL+A + G+L+AA+ V  DR AA++TF  TASG+S LGL A
Sbjct: 310 LVSIFTAFPAALIAALAGLALLAAIGGALSAAMAVPDDREAALITFLVTASGMSFLGLSA 369

Query: 362 PVWGLAAGLA 371
             WGL  G+A
Sbjct: 370 AFWGLIFGIA 379