Pairwise Alignments

Query, 382 a.a., Ribonuclease D from Xanthobacter sp. DMC5

Subject, 381 a.a., ribonuclease D from Vibrio cholerae E7946 ATCC 55056

 Score =  150 bits (378), Expect = 7e-41
 Identities = 113/357 (31%), Positives = 179/357 (50%), Gaps = 23/357 (6%)

Query: 23  VTVDTEFLRESTFWPKLCVVQVASPDEAILIDALSEGLDLAPFYRLMGNERVMKVFHAGR 82
           V +DTEF+R  TF+P+L ++Q+   +   LID      ++ PF  L+ +  V+KV HA  
Sbjct: 33  VMLDTEFVRTRTFFPQLGLIQMFDGENLSLIDPTVLD-EMTPFVELLQDTSVLKVLHACG 91

Query: 83  QDIEIIWHQARLIPHPVFDTQVAAMVLGYGDSISYDQLVQRTVGHSLDKSSRFTDWSRRP 142
           +D+E+  +     P P+ DTQ+ A  LGYG S  +  LVQ  +   LDKS   TDW  RP
Sbjct: 92  EDLEVFQNAFGCTPFPMVDTQIMAAFLGYGLSTGFAALVQDQLQVELDKSESRTDWLARP 151

Query: 143 LSQAQITYAIADVTHLRDIYIKLTADLDARGRGEWVGEEMHVLTSPATYEQHPEQAWERL 202
           LS  Q+ YA ADV +L  +Y KL   +   G  +   +E  +  +  T   +PE A+  +
Sbjct: 152 LSDKQLEYAAADVFYLLPMYEKLVEQVTQAGWWDAALQESELQVAKRTKVSNPELAYLDI 211

Query: 203 KSRVR-KPRELAVLVEVAAWREREAQTRDLPRGRVIKDEVIGEIAVQQPQTPERLAELRS 261
           K   + KP+ELA+L  +A WR  EA  RDL    VIK+  +  I+    ++P+R+ E   
Sbjct: 212 KGAWQLKPKELAILKPLATWRYHEAVNRDLALNFVIKETDLLTISRLALRSPKRMEEEGV 271

Query: 262 LPKGFERSRYGEAVLEAVKRGV-----ARDPKTLPRIERDKPLPNGASATVELLKVLLRM 316
            P      R+   ++  VK  +     A  P+ +P +E       G     + LK  ++ 
Sbjct: 272 DPHAIR--RHSSKIIAMVKTALETPADAYPPEIVPIMEYP-----GYKQLFKRLKDEVKS 324

Query: 317 TAEQNAVAAKVIATTEDLERIAV------SDEADVPAL-KGWRRELFG--VHALALK 364
            +  + +A + +A+ + L ++         D A +P L +GWR  L G  ++ L LK
Sbjct: 325 VSNTSGLATEFLASKKQLNQLLSWVWKRDRDPARLPDLMQGWRLPLLGEKLNTLVLK 381