Pairwise Alignments

Query, 382 a.a., Ribonuclease D from Xanthobacter sp. DMC5

Subject, 385 a.a., putative ribonuclease D from Phaeobacter inhibens DSM 17395

 Score =  359 bits (921), Expect = e-104
 Identities = 192/384 (50%), Positives = 258/384 (67%), Gaps = 6/384 (1%)

Query: 1   MDPITSTEALAAACERLARHPFVTVDTEFLRESTFWPKLCVVQVASP----DEAILIDAL 56
           M  +TSTE L A CE  A+H +VTVDTEFLRE T++ KLC+VQ+A P    + A+L+D L
Sbjct: 1   MKTLTSTEDLQAFCEAAAQHDYVTVDTEFLRERTYYSKLCLVQLAYPGAGDENAVLVDPL 60

Query: 57  SEGLDLAPFYRLMGNERVMKVFHAGRQDIEIIWHQARLIPHPVFDTQVAAMVLGYGDSIS 116
           ++GL L P Y L  NE V+KVFHA RQD+EI W  A++ P P+FDTQVAAMV G+G+ + 
Sbjct: 61  ADGLSLEPLYDLFRNETVVKVFHAARQDLEIFWVDAQVFPKPLFDTQVAAMVCGFGEQVG 120

Query: 117 YDQLVQRTVGHSLDKSSRFTDWSRRPLSQAQITYAIADVTHLRDIYIKLTADLDARGRGE 176
           Y+ LV++ V   LDK+SRFTDWSRRPLS AQ TYA+ADVTHLR IY  L A+L   GR  
Sbjct: 121 YETLVRKIVKQGLDKTSRFTDWSRRPLSDAQKTYALADVTHLRQIYEYLAAELKRTGRAR 180

Query: 177 WVGEEMHVLTSPATYEQHPEQAWERLKSRVRKPRELAVLVEVAAWREREAQTRDLPRGRV 236
           WV EE+ VLT PATY+  P++AW R+K+R    + LAV+ E+AA+RE  A+T ++PR RV
Sbjct: 181 WVEEELQVLTDPATYDVDPQEAWRRVKTRTNSGKFLAVVRELAAFRETYAKTNNVPRNRV 240

Query: 237 IKDEVIGEIAVQQPQTPERLAELRSLPKGFERSRYGEAVLEAVKRGVARDPKTLPRIERD 296
            KD+ + E+A  +P+    L   R L +   +    E +L+AV RGV     + P+ +R 
Sbjct: 241 FKDDALVELASTKPKNASDLGNSRLLLREARKGAIAEGILQAVARGVDCPAGSQPQPDRS 300

Query: 297 KPLPNGASATVELLKVLLRMTAEQNAVAAKVIATTEDLERIAVSDEADVPALKGWRRELF 356
           +       A  +LL+VLL+   E + VAAK+IA + DL+ IA + + +VPALKGWR E+F
Sbjct: 301 REKLQVNPALADLLRVLLKAKTEASGVAAKLIAPSSDLDAIA-AGQRNVPALKGWRLEVF 359

Query: 357 GVHALALKAGQLALAVDKGKVVAV 380
           G  AL L  G++ALA  KG+ V V
Sbjct: 360 GADALRLCNGEIALAA-KGQDVKV 382