Pairwise Alignments

Query, 591 a.a., Aspartate--tRNA(Asp/Asn) ligase from Xanthobacter sp. DMC5

Subject, 500 a.a., lysyl-tRNA synthetase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 58.5 bits (140), Expect = 6e-13
 Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 16/196 (8%)

Query: 94  IEVYALELEVLGPAAELPLPVFGDVEYPEETRLKYRFLDLR-REKLHRNIMTRGAIIDAM 152
           +E Y L  + L P   LP    G  +  +ETR + R++DL   E+  +  + R  ++ A+
Sbjct: 129 MEEYQLLTKALRP---LPEKFHGLTD--QETRYRQRYVDLIVNEESRQAFVMRSKVVAAI 183

Query: 153 RRRMKDQGFFEFQTPIL-TASSPEGARDFLVPSRLHPGKFYALPQAPQQYKQLIMMSGFD 211
           R  M  + F E +TP++        AR F+          Y L  AP+ Y + +++ GF+
Sbjct: 184 RNFMIKKEFMEVETPMMHVIPGGASARPFITHHNALDMPMY-LRIAPELYLKRLVVGGFE 242

Query: 212 RYFQIAPCFRDEDPRADRLPGEFYQLDLEMSFVEQEDVFAAMEPVITGVFEEFAGGKPVT 271
           R F+I   FR+E       P EF  ++  M++ + +D+    E +++ +  E  G     
Sbjct: 243 RVFEINRNFRNEGLSPRHNP-EFTMMEFYMAYADYQDLMDLTEELLSSIAIELLGS---- 297

Query: 272 KNWPRIPYAEALRNYG 287
               ++PY E   ++G
Sbjct: 298 ---AQMPYGEHTVDFG 310



 Score = 43.5 bits (101), Expect = 2e-08
 Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 5/84 (5%)

Query: 481 NGY-EIASGGIRNHRPEAMVKAFELAGYDEATVVERFGGMYRAFQYGAPPHGGMAAGVDR 539
           NG+ E+     ++ R +A V A + AG DEA   +       A ++G PP  G   G+DR
Sbjct: 420 NGFSELNDAQDQDSRFKAQVDAKD-AGDDEAMFYD--ADYITALEHGLPPTAGQGIGIDR 476

Query: 540 IVMLLCGTTNLREISIFP-MNQQA 562
           +VML   T  +R++ +FP M  QA
Sbjct: 477 LVMLFTNTHTIRDVILFPAMRPQA 500