Pairwise Alignments

Query, 311 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score = 87.0 bits (214), Expect = 1e-21
 Identities = 60/173 (34%), Positives = 92/173 (53%), Gaps = 18/173 (10%)

Query: 144 RQARDHALRA-AHTDELTGVANRR-----FAINRANEMMAPHGPGGALCVIDLDNFKHVN 197
           R+A ++ LR  +  D LT + NRR      ++  A     P      L +ID+D+FK +N
Sbjct: 468 RKALENRLRELSEKDALTDLWNRRKFDQTISLECAKRRRYPDQAQSCLAIIDIDHFKRIN 527

Query: 198 DRFGHQTGDDLLRAYCALMAAAIGRADCFGRVGGEEFMLVLPQTDLAEAERRVCDLLARV 257
           D+FGH  GD +LR     +   +  +D   R+GGEEF ++ P T + EAE+    +L RV
Sbjct: 528 DKFGHNEGDLVLRTVAKGIQDQLRESDFIARIGGEEFAIIFPYTSIEEAEQ----VLNRV 583

Query: 258 RASRPLPALPDFTYTFSAGLT--FTPPGDTFSEAYGRADRALYLAKLAGRDRV 308
           R    + +L     T S G+T   T P     ++Y RAD ALY +K +GR+++
Sbjct: 584 RLH--IASLHHQQVTLSGGVTDVCTSP----DQSYKRADLALYESKTSGRNQI 630