Pairwise Alignments

Query, 560 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 452 a.a., putrescine transporter from Sinorhizobium meliloti 1021

 Score = 65.1 bits (157), Expect = 6e-15
 Identities = 109/507 (21%), Positives = 195/507 (38%), Gaps = 87/507 (17%)

Query: 12  APEAGSLQRKISWTGAFWIASGVPALVLFSIGAIGATVGAPAWFVWILSIVFGFIQAFSY 71
           A EA S ++       F +A  +    +  + A  A VGA +   W+++ V     A+ +
Sbjct: 9   AMEAASKKKMNLVQLTFIVAVNMMGSGIIMLPANMAQVGAISLLSWLVTAVGSMAIAYGF 68

Query: 72  AEIAGLFPHKSGGASVYGAIAWVRYGKLLAPFSVWCNWLAWSPVLSIGSGLAAGYVLSIL 131
           A+ AGLF  + GG S Y   A+ + G  L     + +    +  + I    A GY+    
Sbjct: 69  AQ-AGLFNQRPGGMSAYAEDAYGKPGYFLVFLLYFLSLAVGNVAIGIS---AVGYL---- 120

Query: 132 FAPDAAINTWQLTLVDLGWLKAGLTLRINATFVLGAVLLLVAFAIQHRGISQTAKVQVIL 191
               A    W             LT    AT V   +LL +       G   T ++  I 
Sbjct: 121 ----AGFFPW-------------LTSTPIATCVSLIILLWLTTVANFGGPRVTGRIGSIT 163

Query: 192 GVVALLPLILIGLV--PLFTGDVLAANLGPFAPLAKDEAGKVIAGEWNMAGLTLMAG--- 246
               +LP+ L+ ++    F+ +V AA                    WN  GLTL+ G   
Sbjct: 164 VWGVILPVGLLCIIGWAWFSSEVFAA-------------------AWNPNGLTLVQGMGS 204

Query: 247 GLFIAAWSTYGFETAVCYTREFRDPKTDTFKAILYSGLLCIFVFTIVPISFQGVLGLGQL 306
            + +  W+  G E+A   +    +PK D   A L+  L    ++ +     QG++   +L
Sbjct: 205 SISLTLWAFLGMESAAQNSDAVENPKRDVPLACLFGTLGAAIIYILSTTVIQGIVPNAEL 264

Query: 307 VTPAVVDASGAVTTPAVYSGILSADIYSGMGVASAMADMIKGGPIVHTVIVVMLILALML 366
                     A T P                 A A A M    P + +V++ + +LA + 
Sbjct: 265 A---------ASTGP----------------FALAFATMFN--PAIGSVVMALAVLACVG 297

Query: 367 AIITSMAGSSRTLYQASVDGWLPKYLSHVNENGAPTRAMWTDLGFNLILLMMS------- 419
           +++      ++T   A+ +   P   S VNE GAP   M        +L +M+       
Sbjct: 298 SLLGWQFTIAQTARAAADERMFPSLFSRVNEMGAPVTGMIVMGVVQSLLALMTISPTLNE 357

Query: 420 DYVFILAISNVCYILFNFLNLNSAWMHRIDRPAWDRPFKAPMWLIGMGTVLAYVNLFLLG 479
            +  ++ ++ V  +L   ++L++ ++        +  F+    +  +G + +   ++  G
Sbjct: 358 QFAALVNLAVVTNVLPYIISLSALFVMMRAAGVSESKFRLNSSIAIVGMLYSVFAIYASG 417

Query: 480 MGADIWGAGTLVTGL--IVSAAIIPVF 504
             A +   G LVTG+  I+   I P F
Sbjct: 418 KDAVL--GGMLVTGIAFIIYGLIAPRF 442