Pairwise Alignments

Query, 386 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 366 a.a., outer membrane component of uptake system, probably for ferrous iron (from data) from Pseudomonas fluorescens FW300-N1B4

 Score = 90.9 bits (224), Expect = 5e-23
 Identities = 105/375 (28%), Positives = 149/375 (39%), Gaps = 29/375 (7%)

Query: 22  RRDLLLGGAALLALTTLPTGLRAAELDEGWLATAGVGEGFA---AIGLDPSFAATPEAPS 78
           RR  L  G+ LL   TL       + D+  L  +   +G     A+G             
Sbjct: 3   RRQALTLGSLLLGAVTLGGWTLFKQKDKSPLLLSARDDGDGKHYAVGYRLDGTRVFATQV 62

Query: 79  EARLHGIEASPMGPLAVAVGRRPGRIALVFDRHKGGVVASFGPGEGRVFSGHGRFTADGR 138
             R H I   P  P+A+ V RRPG  + + D   G ++ +      R F GH      G 
Sbjct: 63  GQRCHDIINHPTLPIALFVARRPGTESYLIDLRDGTLLQTVVSQPNRHFYGHAVIHHSGD 122

Query: 139 -LFLT-NEIERPADGVRVMGRGVVAV-RAVDGGFAIRDEWASGGDGPHDL--MRSGAALV 193
            L+ T N+   P       GRG++ V +  D       E ++ G GPH +  M  G  L+
Sbjct: 123 WLYATENDTSDP-------GRGLLGVYKFEDERLVHSGELSTHGVGPHQVSWMPDGETLI 175

Query: 194 IANGGIEPNTPEARDAEVTGSGITLVDPATGAVRGEGRL--SPDLASL--SLRHLARDGN 249
           +ANGGI     E+R        +  ++P+   ++ +G L     LA    S+RHL    +
Sbjct: 176 VANGGIRTEA-ESR----VEMNLNAMEPSLVLMQRDGTLLSKETLAQQMNSVRHLGV-AS 229

Query: 250 GGTVVAAQDLLKDGEARPLLFRIAADGA-LTPFDAPDDAWRALRGYVGSVAYDPSGRFVA 308
            GT+VA Q  + D      L  I   G     F  P+   +A+  Y  SVA     R VA
Sbjct: 230 DGTIVAGQQFMGDAHESSELLAIKRPGQPFVAFPVPEHQLQAMGHYTASVAVHSELRLVA 289

Query: 309 CATPRGNQVAVWQAD-GRYIGAVPLTDGCGLAAGAEAGTFVAASGYGEVIVVKAAPEGVA 367
              PRGN+  +W  D G      PL D  G+  GA A  FV  SG G           + 
Sbjct: 290 LTAPRGNRFFIWDLDSGEVRLDAPLPDCAGV--GAVADGFVVTSGQGRCRYYDCRQTTLV 347

Query: 368 ITARRTGGPRYDNHM 382
                     +DNH+
Sbjct: 348 AKPLELPAGLWDNHL 362