Pairwise Alignments

Query, 290 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

Subject, 297 a.a., inner-membrane translocator (RefSeq) from Shewanella loihica PV-4

 Score =  149 bits (375), Expect = 1e-40
 Identities = 81/288 (28%), Positives = 158/288 (54%), Gaps = 6/288 (2%)

Query: 2   EVLIQLVLNGILLGSMYAIISVGLTLIFGIVRVVNFAHGEFLMVGMYAAYLLAAKFGLHP 61
           E+LIQL++NG+++G +Y ++ +   L++   ++VNFA GEFL+VG +  +     F L  
Sbjct: 4   ELLIQLIINGLIVGLLYGVVGMCFVLVYKSTQIVNFAQGEFLLVGAWVCWAFLTYFQLPF 63

Query: 62  YAAAVPIVILLFAIGAAVQRFLIQPLLGAEEHIQIFATVGLSTALVNLALLVFGADLYSI 121
           +   +  +  +   G  +Q  +++P++G      I  T+GLS    +L   +FG    S 
Sbjct: 64  FVGFLFTLCFMAVFGVLLQMIVLRPMIGEPIISVIMVTIGLSIFFQSLTKWIFGVSPQSY 123

Query: 122 PPSAAQGTVMVGGFSLVKGQLVMFVCALALVAGLHLFMQSTALGRAIRATAQNRTAALLM 181
           P      ++ + G ++    L+  V A+ ++A   LF + +  G A+RATA ++  A  +
Sbjct: 124 PQVFDTQSIAIFGLNIELAYLMSTVIAILIMAAFFLFFKYSKHGLAMRATAFDQQVAQSL 183

Query: 182 GVKVDQIYVIAFGIGAACVGLASALVMPLYPVTPTIGTYFVLTAFVVVVLGGMRSMYGAF 241
           G+ V Q++ +++GI A     A  ++  +  V+ ++ T   +  F  V+LGG+ S+ GA 
Sbjct: 184 GISVKQVFAMSWGIAATVSATAGVVIGMVNGVSDSLST-IGIKVFPAVILGGLDSIVGAI 242

Query: 242 FGAMIIGLVDSLSGYYIAP-----DLKEVVYFAIFLAILIFKPTGLFG 284
            G ++IG++++++ ++ +      ++ ++  F + L IL FKP GLFG
Sbjct: 243 VGGVVIGVLENIAEFFDSQWLHIGNMYDIAPFYVLLVILWFKPYGLFG 290