Pairwise Alignments

Query, 367 a.a., HTH-type transcriptional regulator CdhR from Xanthobacter sp. DMC5

Subject, 329 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Pseudomonas stutzeri RCH2

 Score = 94.0 bits (232), Expect = 5e-24
 Identities = 78/284 (27%), Positives = 120/284 (42%), Gaps = 10/284 (3%)

Query: 73  QVMSPHLRPARSSCGIDIQPTSDLMDPKGFDYIVVVGGLLRGVPARSDPVGEYLKRAAAA 132
           +++SP  +P  +  G  I     L+D      +    G    + A+   V  +L+   AA
Sbjct: 52  RLVSPDGQPVNTFSGTGIA-VDGLLDEADMVILPAFWGDFDALCAQYPEVAPWLRERHAA 110

Query: 133 GLPLIGVCTGSFLLCRLGLMAQRKCCVSWYHYRDFLDEFPTLVPVADQLFVVDGDRITCS 192
           G  + G  TG F + + GL+  R+    W    DF   FP +   AD+  + D D + C+
Sbjct: 111 GSVICGEATGVFWMAQAGLLEGREATTHWRFANDFAARFPGVAFSADK-HLTDSDNLYCA 169

Query: 193 GGAGVA-DLAARLVTEHLGAATAQKALNILLIDRPRAAESAQPAPRLAEGTVD---DARV 248
           GG   A DL   LV    GA  AQ     +L +  R+        RL  G      D R+
Sbjct: 170 GGTTSACDLYMYLVERFCGAHVAQGMARDVLFELQRSYSPG----RLGFGGQKLHLDTRI 225

Query: 249 SRALLMMEQNLAEPLAIADIADALGVGVRQLERLFADRLRESPQESYLALRLRHARWMLA 308
            +    +E N AE     D+A   G+ +R   R F     + P      LR+  A+ +LA
Sbjct: 226 LQIQEWLEANFAEKFRFEDVARQHGMSIRNFMRRFHAATGDKPLHYLQRLRIETAKSLLA 285

Query: 309 NTRFSAARIAADLGFADGSHFGRAFKARFGATPAAFRRTVAPRS 352
            T  S   I+ ++G+ D S F R F+     +P  +R+   P S
Sbjct: 286 TTGKSIKTISYEVGYDDASFFARLFRQHTELSPNHYRQKYRPES 329