Pairwise Alignments

Query, 346 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 315 a.a., peptide ABC transporter permease from Klebsiella michiganensis M5al

 Score =  174 bits (440), Expect = 4e-48
 Identities = 106/297 (35%), Positives = 171/297 (57%), Gaps = 21/297 (7%)

Query: 61  VARLAPVGRRHALLVFLSNPTAVAGLLILAVVVGAALAAPILFP--DDPLE--MAGRPLQ 116
           +A++ P   R A      N  A+  LL+L V+    +  P+  P  DD  +  M  +P  
Sbjct: 20  LAQVTPSPWRQAWRALRRNRLAMLCLLLLTVMALWCVLGPLWSPWQDDATDALMNNKP-- 77

Query: 117 WPGQNPRFPLGTDALGRDVLAGLVHGARVSLLVGACATLAGLLAGILVGATAGYFGGVVD 176
            PG      LGTD LGRD+   L+   R+SL++G    L  +  G L+GA +GY GG+ D
Sbjct: 78  -PGA--AHWLGTDFLGRDIYTRLLLAGRISLIIGLLTMLLSVALGYLLGALSGYAGGLTD 134

Query: 177 DVLSKLIEIFQTVPGFILLIVLVAIAQP-------SVPAIALAIAAVSWPQVARLVRAQF 229
            ++ +  ++  T+PG  LLIV  A+           +  + + ++ + WP++ARLVR Q 
Sbjct: 135 KLIMRFADLVMTIPGLPLLIVAGAMLSELDFSPDSRIYMVVIMLSLLEWPKLARLVRGQC 194

Query: 230 RAIKEKDFVAAARALGFGHGRIIFREILPNALPPVIVLASVTVATAILMESALSFMGLG- 288
            +++E+DF+ A + LG    R +F  +LPN +P ++V+A++ VA AIL ESALS++GLG 
Sbjct: 195 LSLRERDFMLATQILGLSARRRLFGHLLPNTVPILVVMATMAVANAILSESALSYLGLGV 254

Query: 289 DPNVVSWGSMIGTGRDLL---RTAWYLSAVPGVAIVLTVLSLNLIGDGLNEALNPRL 342
            P   SWG+M+     L+   R  W L   PG+AI +TV+++N++GDGL +A++P++
Sbjct: 255 VPPTPSWGNMMDAANSLIDFQRRPW-LWMPPGIAIFITVIAINVLGDGLRDAMDPKM 310