Pairwise Alignments

Query, 291 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Xanthobacter sp. DMC5

Subject, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

 Score =  160 bits (406), Expect = 2e-44
 Identities = 81/247 (32%), Positives = 141/247 (57%), Gaps = 6/247 (2%)

Query: 41  LLLSWAAPVLLVVVWEVLAQVGYVAPHVLPAPSKVVRTAYK----LATSGTLLADLGTSL 96
           +L +   P++ ++ WE LA +    P +LP    V+         +  +G L+ +   S+
Sbjct: 3   ILKNLTLPIIGILAWEALA-IYLNNPVILPKVESVISILLNPGVGILGTGNLIENTIVSI 61

Query: 97  VRAAVGFVVGGSIAFALGILVGFSRLAEALVDRSVQMVRAIPFLALLPLVIVWFGVGEGQ 156
            R  +GF + G+ A  LG+L+G+  L   L D +V+++R IP LA +PL + WFG+GE  
Sbjct: 62  KRVLIGFFIAGAFAIPLGLLMGYYSLINDLFDTTVELLRPIPPLAWVPLALAWFGIGESS 121

Query: 157 KIFLVALGVAFPIYINTTLGIRQVDPKLIELGRVQGLSTRQMISRIILPGALPSILTGVR 216
             F++ +G  FPI INT  G++ V   +IE  +  G ST+ ++  +++P + P ILTG+R
Sbjct: 122 MHFIIFIGAFFPILINTISGVKSVPVIMIEAAKTLGGSTKDILKSVVVPASSPDILTGLR 181

Query: 217 YSLATAWLALVVAETI-GAQAGIGFLAMDAREFLRTDVVVLTIVIYALIGVVADSLARLL 275
                AW+ +V AE + G+ AG+G+L M A    + ++VV +++I  +IG++ D   R +
Sbjct: 182 VGAGIAWMCVVAAEMLPGSDAGLGYLIMYAYSLSKMNIVVASMIIIGIIGIILDKGLRYI 241

Query: 276 ERRLLAW 282
           E++   W
Sbjct: 242 EKKYFCW 248