Pairwise Alignments

Query, 360 a.a., Adaptive-response sensory-kinase SasA from Xanthobacter sp. DMC5

Subject, 1019 a.a., sensor histidine kinase/response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  111 bits (277), Expect = 1e-28
 Identities = 88/285 (30%), Positives = 137/285 (48%), Gaps = 28/285 (9%)

Query: 86  AAAVVAFVGVARHVRRLHAA-REAAEARAQAAEAESQRAAAESLAKSRFLAEMSHELRTP 144
           A A  A +     V+ L+ A  E  E R +  E E  +A   +  K+RFLA MSHE+RTP
Sbjct: 514 AGAHHAIISTMNEVKLLNEALEERVEKRTKELEQERDKANQLAAVKARFLANMSHEIRTP 573

Query: 145 LNTVMGFSEMMAEEVLGPHRVPAYAGYARDIHGA-------GRHLLALADDLLDLARIES 197
           +  + GF+E +     G            ++H A         HL  + +D+LD A+I+ 
Sbjct: 574 ITIIKGFTEQILPNTQG------------EVHNALCKIEQNTLHLQNVINDILDAAKIDE 621

Query: 198 GHRTLVETPVRLDALAEDCLAMMRPLAAERRLS--LSLERLGIPRLWGDERAIRQIALNL 255
           G  T+ E  V +  L       M+ LA  + L+  L+++   I  +  D   ++QI LN 
Sbjct: 622 GKMTIAEQTVAIIPLLNSLSDSMKFLARTKNLTTELNIDIADIEHIITDPFRLKQILLNF 681

Query: 256 LANAVKFTPVEGQVRLVAAVDAKGGTVLIVEDSGPGIADSELPLGGAHARESRLDLATGR 315
           ++NAVKFTP +G V+LVA +       + V D G GI+D +          ++ D +T R
Sbjct: 682 ISNAVKFTP-KGTVKLVANITNADELCIAVIDKGIGISDQQ--ASTLFEAFTQADSSTSR 738

Query: 316 ---GAGLGLAIARGLATLHGGELELARRAGGGTRARVTFPSARTL 357
              G GLGL I++ LA     +L +    G G+   VT P ++ +
Sbjct: 739 DFGGTGLGLFISKQLADAMFIKLHMQSELGVGSCFSVTLPESKII 783