Pairwise Alignments

Query, 332 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 329 a.a., ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components from Pseudomonas stutzeri RCH2

 Score = 72.0 bits (175), Expect = 2e-17
 Identities = 69/303 (22%), Positives = 129/303 (42%), Gaps = 28/303 (9%)

Query: 28  AQPKEKVVVSWLPIMQSFAYYVAVEQKLFEKRGIEIESVRFQAPNQIIDSLVSGRADAGA 87
           AQ +EK  V ++ +M      VA E  L+EK G+ +E + F +   +I ++V G+ D G 
Sbjct: 18  AQAQEKFKVGYIRVMDDAQAMVAHEAGLYEKHGLNVELIEFSSGTDLIKAIVGGQLDTGV 77

Query: 88  PGAAAGIAVIAETQFPGTFKVFGLQGGGIKVNRINDALIVANNSPIATFGDLKGKSLG-- 145
            G    +A  ++       KV G    G        +++V  ++ I     LK ++L   
Sbjct: 78  LGFTNAVAWASK---GADLKVVGGAQQGY------HSILVREDTNIQDVAGLKDRTLASQ 128

Query: 146 HLPGIQWRTLSRYMVRKAGLDPDKDVRLVELAVGLQVQAVIAGTVDATLSLEPVGSIAVA 205
                    L    ++ AGL P  DV ++ ++  + VQ++++G VDA    EP   IA  
Sbjct: 129 REGSTADAVLRGVTLKSAGLKP-SDVNIMGVSPAVAVQSLVSGRVDAAFLFEPYDRIAQL 187

Query: 206 LGEAKRAITNPMSLAVYDPFYSGVSLLTTKFIKERPKVAKAFVEALDEATIMAEKNYTSL 265
           +   ++       +    PF   V + + + + +R       ++A  EA  M +K     
Sbjct: 188 VAPVRQV----YEIGEVWPFPCMVVITSGETLAKRKDAVWKSLDAQREAIEMLDKQPAEA 243

Query: 266 RSILPAYTAVKPD---------QVEIVAQPYLRPWT---ELNETDLTSYQTFVNVFRSEG 313
             ++ +Y   +P            E+V +  +   T   +L+  DL   Q   ++ + +G
Sbjct: 244 AKLIASYFIAEPTLKTLKRGELPREVVIEEAIGTQTFSAKLDANDLARIQELADILQEQG 303

Query: 314 ALK 316
           +LK
Sbjct: 304 SLK 306