Pairwise Alignments

Query, 287 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

Subject, 290 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

 Score =  186 bits (472), Expect = 5e-52
 Identities = 108/283 (38%), Positives = 158/283 (55%), Gaps = 1/283 (0%)

Query: 3   LQLFLNGLVTGLLLALPALALTLVFGILRFANFAVGAFLTLGAYAAYTANVVLGLPLPIA 62
           L L  NG V GL+ AL AL++TLVFGI RF N A G   T GA+A     V+    LPI 
Sbjct: 7   LNLAFNGAVIGLITALAALSITLVFGIARFPNAATGDVATAGAFAGLLGPVLGSGALPII 66

Query: 63  AAVAAATVALASLIADALVFERLRMRGSITLLVASMGVSLVVENICRFIFGNAARSFDLA 122
             V  AT A  SL+   ++F  L  R  +  L+AS+G++  +  +  +  G+  R + L 
Sbjct: 67  L-VGMATSAAVSLLFYVVLFRALAKRSPVASLIASIGMAFFLRAVLTYFIGHDQRVYPLP 125

Query: 123 VARPIRWNGLRINHEQLITAGVVVIALVLLHLLITASPLGRAMRAVADNASLAAVRGVER 182
           + R + +  LR+    +        AL +   LI  +P+G+ MRAVADN  LA   G+  
Sbjct: 126 LVRAVPFGPLRVQAADIQVIVWAGAALAVTFALIHLTPIGKRMRAVADNPDLARSSGINA 185

Query: 183 RTIARITFALTGALIGLAGVLAGLDRAIDPLMGWNYQIPIFAAAILGGLGSPIGAVAGAL 242
             +  + + + G L GLAG L G+   + P MGW+  +P FAA ILG +G+P+GAV G L
Sbjct: 186 NKVMVVMWVVAGLLAGLAGTLLGVKTVVSPEMGWDLLMPAFAATILGTIGNPLGAVLGGL 245

Query: 243 LIGVAEEMSALILPVSFRQIVSFGVILLLLLFRANGLFGAKAI 285
           LIG+A+E+S  ++  +++  V F V+LL LL R  GLF   ++
Sbjct: 246 LIGLAQELSTPLVGFTYKIGVGFLVLLLTLLIRPQGLFAKNSL 288