Pairwise Alignments

Query, 321 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 296 a.a., membrane protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 81.3 bits (199), Expect = 3e-20
 Identities = 65/286 (22%), Positives = 123/286 (43%), Gaps = 15/286 (5%)

Query: 16  LATALLWGSNHAAARAIHDALPLPSLVFWRWAIALALLLPIALPGLLRERSAIRRNAGRI 75
           L   ++W  N    +     +   ++ F+RW  A+ +L P  L  + + R  I     ++
Sbjct: 7   LLAVVIWAGNAIVNKLSFGIIAPEAIAFYRWFFAMLILTPFMLKSVWKNRRRIIPLLPKL 66

Query: 76  ALLGLVGVGLFSVCLYAGAYLSPALEVGLLNATTPIWVLLIATFVGRARPRFAQIAGILI 135
           A L  +G+ L     Y  A  + A  + L+N+  P+  L +A  + + R     + G +I
Sbjct: 67  ATLASLGMVLNQSLAYFAAATTTATNMALINSLVPMISLFLAVPLLKQRLSPLVLGGSVI 126

Query: 136 AMVGVTLVLMKGLPAELQGFHFGAGNLASIAAAVLFAVYTYSLGQNPIGISALSLTALTA 195
           +++G+  +L  G  A L       G+L  + +A ++A+Y   L +  + IS      +  
Sbjct: 127 SLLGLVFMLSHGDIANL-AIGVTEGDLLLLISAFVYALYGVLLKRWQLPISTWESVYIQG 185

Query: 196 LAGFVLVFCPVY--AVFLCLGGQDPFTSGLKLEPVTLAVLYIAAGPTLLGNLFWIYGAAR 253
           +   VL+  P+   A  + +  Q            T  ++Y A G +L+    WI G  +
Sbjct: 186 IIA-VLMLTPLLFSAPSIAISSQ-----------ATPLIVYAAFGASLIAPWAWINGINK 233

Query: 254 VGAARAGPFLYFSPLATIALSATLLGETIMPIQIAGGAAILAGLWI 299
           +GA R   F    P+     +A +L ET+      GG  ++ G+ +
Sbjct: 234 LGAERTSIFFNLMPILAAIFAAIILNETLAIYHYLGGTMVILGVML 279