Pairwise Alignments

Query, 319 a.a., Lactose transport system permease protein LacF from Xanthobacter sp. DMC5

Subject, 337 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  117 bits (293), Expect = 4e-31
 Identities = 98/319 (30%), Positives = 152/319 (47%), Gaps = 23/319 (7%)

Query: 12  KSGEAKASSR-ATLADPRRATRLVLAIFLGPALLVYCGLTAYPAFRTIYDSFFTIEGMDA 70
           K  EA  S R   LA P R   L   + L PA+ +   +  YP F ++  SF  I GM A
Sbjct: 31  KKQEAIMSLRFLDLARPSRQHWLGYLLLL-PAVALVALIIVYPLFVSLDLSFQKI-GM-A 87

Query: 71  TFVG------LANYRDLMGDETFWVAVRNTFIWSFVAPVIDVATGLLLALAL---YAGVP 121
           T         L NY  L     FW +   T     V      A GL  AL +   + G  
Sbjct: 88  TLSAPRKPFTLENYHKLFASPDFWNSCWVTIKLVVVVSAACFAVGLGTALLVNNRFKGRT 147

Query: 122 FAR-FLRVAWFTPVLLSYVVVAILWMWIYNYDWGVLNVMLRAVGLGDLASSWLGDPNLAL 180
            AR F+ + W  P +++ V+ A    WI++  +G++N +   +G+     +W  +P  A 
Sbjct: 148 LARLFVALPWAVPEVIAVVIFA----WIFDSSFGLMNWLFIKLGITSQMINWFSEPTAAF 203

Query: 181 AAVIVTHAWKWAGFNMVVCLAAIHSLPKEVLEASDLDNCGWGAKLRYIIIPMLRPTLLSL 240
             V +T  WK   F  ++ LA + S+P++   A+ +D      +  YI IP+L P L   
Sbjct: 204 WVVAITMIWKGYPFVSIMTLAGLQSIPEDFYNAAKVDGANAFQRFWYITIPVLMPVLGVT 263

Query: 241 YILSFIGKMKVFDLVWIMTQGGPLWATETVSTYVYKRAFNWNTFDLGYPSAIATVWFLVV 300
            +L  +   + F ++ ++T GGPL AT+T+S   Y +AF +  F++GY SAI  V  LV+
Sbjct: 264 SVLVVLWVFRDFSIIKVLTDGGPLKATQTLSIMTYDQAFGF--FNMGYASAIGIV-TLVL 320

Query: 301 CAAVIILNRVLGSRERLEY 319
           C    +L  +LG + +  Y
Sbjct: 321 CVVASLL--MLGRKSQAMY 337