Pairwise Alignments

Query, 319 a.a., Lactose transport system permease protein LacF from Xanthobacter sp. DMC5

Subject, 294 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  129 bits (325), Expect = 7e-35
 Identities = 86/290 (29%), Positives = 141/290 (48%), Gaps = 3/290 (1%)

Query: 28  RRATRLVLAIFLGPALLVYCGLTAYPAFRTIYDSFFTIEGMDAT-FVGLANYRDLMGDET 86
           RR+T +   + L PA+     + AYP   T   SF        T +VG ANY D + + T
Sbjct: 4   RRSTIIFAWVLLLPAVFYVTVIVAYPLVDTFVLSFTDASLKKTTKWVGTANY-DKIFNAT 62

Query: 87  FWVAVRNTFIWSFVAPVIDVATGLLLALALYAGVPFARFLRVAWFTPVLLSYVVVAILWM 146
           F   +  TF+W+  +  I +  G   A+ L A VP     RV    P ++   +   +W 
Sbjct: 63  FAEVILRTFVWTAFSVTIKMIIGTFGAVMLNAAVPGRALFRVLTMPPWIVPMAIGIFMWG 122

Query: 147 WIYNYDWGVLNVMLRAVGLGDLASSWLGDPNLALAAVIVTHAWKWAGFNMVVCLAAIHSL 206
           W+YN  +G+++  L+  GL D   ++L   + A  A IVT  W       +  LA++ ++
Sbjct: 123 WMYNGQFGMISGTLQNWGLVDGPVAFLAHGSTAFWATIVTDVWIGVPLVTLYMLASMQAI 182

Query: 207 PKEVLEASDLDNCGWGAKLRYIIIPMLRPTLLSLYILSFIGKMKVFDLVWIMTQGGPLWA 266
           P+++ EA+  D  G   + R I +P+L P+++++ +LS I     FD++WI+TQGGP   
Sbjct: 183 PQDLYEAAWTDGAGRFYRFRRITLPLLVPSMITMSMLSLIATFNSFDIIWILTQGGPNGD 242

Query: 267 TETVSTYVYKRAFNWNTFDLGYPSAIATVWFL-VVCAAVIILNRVLGSRE 315
           T T+    Y+ A     +  G   A+    FL + C A   +   L + E
Sbjct: 243 TTTMIIDTYRTAIGSKKYGEGAARAVLICIFLSIFCIAYFRVTHRLATGE 292