Pairwise Alignments

Query, 319 a.a., Lactose transport system permease protein LacF from Xanthobacter sp. DMC5

Subject, 314 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  139 bits (350), Expect = 9e-38
 Identities = 86/303 (28%), Positives = 157/303 (51%), Gaps = 10/303 (3%)

Query: 7   LRTAAKSGEAKASSRATLADPRRATRLVLAIFLGPALLVYCGLTAYPAFRTIYDSFFTIE 66
           + T A+S   +  +  T    +    +   +F+ P  L        P   ++  S F + 
Sbjct: 1   MTTIAQSAARRRHAGRTRLSAKHREWIAGYLFVLPDALGLFIFLGVPMALSLVLSVFEVN 60

Query: 67  GMDA-TFVGLANYRDLMGDETFWVAVRNTFIWSFVAPVIDVATGLLLALALYAGVPFARF 125
           G    +FVG  NY  +  D  FW   R T +++ +   +    GL LAL +     F   
Sbjct: 61  GFGGYSFVGARNYLRMWNDPLFWKGARVTALYAAMLVPLLYVCGLGLALLVQRTDRFNAI 120

Query: 126 LRVAWFTPVLLSYVVVAILWMWIYNYDWGVLNVMLRAVGLGDLASSWLGDPNLALAAVIV 185
           +R  +F P ++S VVVA++W ++     GV++ +  A+ +G +  S LGDPN AL  +++
Sbjct: 121 MRSMFFAPHMVSLVVVALVWQFMVVDKIGVVSRLTAALDIGGI--SLLGDPNFALITIVL 178

Query: 186 THAWKWAGFNMVVCLAAIHSLPKEVLEASDLDNCGWGAKLRYIIIPMLRPTLLSLYILSF 245
              W   GF M++ L  +  +P++  EA+ +D  G  A+  +I +P+L+PT   + ++S 
Sbjct: 179 VSVWFLMGFYMLIFLGGLQDIPRQYYEAAMIDGAGAIARFWFITLPLLKPTSFFVIMVSM 238

Query: 246 IGKM---KVFDLVWIMTQGGPLWATETVSTYVYKRAFNWNTFDLGYPSAIATVWFLVVCA 302
           +  +   + FD++++MT+GGP  AT  +  Y+Y++AF +  F  GY +A+A++  LVV  
Sbjct: 239 VAAVAGAQAFDIIYVMTKGGPANATSVLIVYIYQQAFGFGAF--GYAAAMASI--LVVAL 294

Query: 303 AVI 305
            ++
Sbjct: 295 MIV 297