Pairwise Alignments

Query, 257 a.a., Inner membrane transport permease YadH from Xanthobacter sp. DMC5

Subject, 270 a.a., ABC-2 transporter component (NCBI) from Rhodospirillum rubrum S1H

 Score =  148 bits (373), Expect = 1e-40
 Identities = 73/254 (28%), Positives = 140/254 (55%), Gaps = 3/254 (1%)

Query: 5   VNLPAIRAIYTYEMNRTRRTIGQSIVSPVLSTSLYFVVFGSAIGSRMSEVGGVPYGAFIV 64
           VN   +  +Y  E+ R  +   Q++ +P+++T ++  +F  ++G + ++ GG+ +  F+ 
Sbjct: 19  VNWLGLWELYLKEVRRFLKVYLQTLAAPLVTTLIFLAIFALSVGPQTAQ-GGLGFMEFLA 77

Query: 65  PGLMMLTLLTQSISNAAFAIYFPRFTGTIYELLSAPVSPFEIVAGYVGAAATKSVLLGLI 124
           PGL+M+ ++  + +N + ++   +  G I ++L  P++  E+   Y     T+ V++G+ 
Sbjct: 78  PGLIMMAMVQNAFANTSSSLIIAKVQGNIVDVLMPPLNATELTLAYALGGVTRGVMVGIF 137

Query: 125 ILATAALFVPMEVRHPFWMLTFLVLTAVTFSLFGFIIGIWADGFERLQLIPMLVITPLTF 184
           +      FV + +   F+++      ++  SL G I GIWAD F+ +  +   ++TPL+F
Sbjct: 138 VALGMMAFVTLHIHSVFFIVYHAFAASLMLSLLGMIAGIWADKFDHMASVTNFIVTPLSF 197

Query: 185 LGGTFYSLDMLPPVWRTVTLFNPVVYLVAGFRWSFFGTADVRVEVSAAMTLAFLIACLLI 244
           L GTFY++D LP   R +   NP  Y++ GFR+ F G  D  + ++  + +      L  
Sbjct: 198 LSGTFYTIDRLPESLRFLAHLNPFFYMIDGFRFGFIG-HDQAMPITGLVVVGGFNVVLAA 256

Query: 245 VRW-MFRTGYRLKS 257
           V W MFRTGY+LK+
Sbjct: 257 VCWQMFRTGYKLKA 270