Pairwise Alignments

Query, 666 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 830 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score =  172 bits (435), Expect = 7e-47
 Identities = 105/330 (31%), Positives = 169/330 (51%), Gaps = 12/330 (3%)

Query: 337 REVQEDRRRLAYALEGANDGIWDWHLPSDAVFFSARAHRMLGLDPDHAKKRLTDYGEVVH 396
           +++++  +R  +A+E +  GIWDW+L  ++VF S R   MLG  P+     L  +   +H
Sbjct: 258 KQLKDSEQRWLFAVEVSRYGIWDWNLEDNSVFLSDRWKDMLGYGPEDLVPELATWESRLH 317

Query: 397 PEDLPAVAKSLKDHAEGRHLLFQAEMRARHRNGSWLWVLVRGKIVERDPVGRPTRAVGTV 456
           PED   + K+L  +  G    F++  R RH+ G ++WVL RG  VE +  G+P R +GT+
Sbjct: 318 PEDKEGILKNLNAYLNGETEEFESVHRLRHQQGHYIWVLDRGMTVEWNEKGKPLRMIGTL 377

Query: 457 TDISQRKHLEAALEHAASHDPLTGLSNRAGFDRALEQARRRLVRDGALFAVVLIDIDYFK 516
           +D+++    + A  H A HDPLT L+NR     AL Q +      G+  A+ ++D+D FK
Sbjct: 378 SDVTEDIRNQKAAMHQAKHDPLTDLANRRALMDALYQQQD---ESGSCTALFMLDLDNFK 434

Query: 517 SVNDQHGHMAGDLLLTTAARRLQSAIRAGDLVARYGGDEFAIIAAG------KSREEFAA 570
            VND  GH  GD LL   A RL S   +  L+AR   DEF ++          ++    A
Sbjct: 435 VVNDALGHHGGDRLLIQIAARLSSYFSSNSLIARVAADEFVVLVKKLPEDLLGAQRRAQA 494

Query: 571 MADRLHKHLSRPVEVEGLALPSSFSLGMAVAD-DRTLDAAALIAEADAALYAAKDAGRGT 629
           +A ++ + ++R   + G     S S+G+A+ D   T+     +   + AL  AK++GR  
Sbjct: 495 LASQMRQLIARSFHISGHTFNLSASVGIAIIDPSETIPPEQQLKRVNMALAQAKESGRDA 554

Query: 630 WRAVGIAARTAEEAAHETPRRQMLPHSGLR 659
              V  ++   + AA     R  L H+  R
Sbjct: 555 --CVVYSSEMDKRAAQNLMIRTELVHAVTR 582