Pairwise Alignments

Query, 305 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 426 a.a., Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  120 bits (301), Expect = 6e-32
 Identities = 89/310 (28%), Positives = 152/310 (49%), Gaps = 23/310 (7%)

Query: 4   LILAFVLFAALAAVPAFADTAMLTLVARAMIFALAATSLGFILGQGGLVSFGHAATMGIG 63
           +I A ++ A +   P FA+  +LT+V   +I+ L    L  ++G  GL+  G+ A   IG
Sbjct: 99  IIPALIVIAIV--FPFFANKYVLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIG 156

Query: 64  AYAVGILMEEGVRDALVSFPVAMAAAGLFALVTGAISLRTRGVYFIMITLAFGQMAFFVT 123
           AY + +  +          P+A  AA +   + G   LR  G Y  ++TL FG++   V 
Sbjct: 157 AYGLALGYQYLGLGFWTVLPLAAIAAAMAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVL 216

Query: 124 QS-LSAYGGDDGLSLAARSTVA---GARWLKDPKTFH----------------YVVLGLL 163
            + LS  GG +G+ + + + +    G R       FH                Y+VL + 
Sbjct: 217 NNWLSFTGGPNGMPVPSPTFLGLEFGRRAKDGGVPFHEFFGIDYNPNIKFLFIYIVLFIT 276

Query: 164 ACTVL-VSTVLARAPFGRVLAAGRDNERRLRALGVDPYAYRLVAYVIAGAFAGLAGALYA 222
              VL V   L R P GR   A R++E   R++G++    +L A+ I  + AGLAG  +A
Sbjct: 277 VLLVLYVKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFA 336

Query: 223 NLTEFVSPAYLSWHRSAEFIVMVVAGGPATALGPVLGALGVVLLEDGLAHLTEHWRIIFG 282
           +   FV+P+  ++  SA  + +VV GG  + +G V+ A  + +  + L   +E+  ++FG
Sbjct: 337 SYQGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEYRVLLFG 396

Query: 283 PLLVLLVLAR 292
            L+VL+++ R
Sbjct: 397 VLMVLMMIWR 406