Pairwise Alignments

Query, 643 a.a., DNA primase from Xanthobacter sp. DMC5

Subject, 652 a.a., DNA primase (EC 2.7.7.-) from Pseudomonas fluorescens FW300-N2E2

 Score =  288 bits (736), Expect = 7e-82
 Identities = 198/553 (35%), Positives = 284/553 (51%), Gaps = 40/553 (7%)

Query: 6   AFLDEIRARLPVSEVVGRRVKLKKQGREFAGLSPFNAEKTASFFVNDQKGFYHCFSSGKH 65
           +F+D++  R  + +VV  R+++KK G+ +    PF+ EKT SF V+  K FY+CF  G  
Sbjct: 8   SFIDDLLNRTDIVDVVSSRLQMKKAGKNYTACCPFHKEKTPSFSVSPDKQFYYCFGCGAG 67

Query: 66  GDVFDFLMETEGASFGEAVERLAAMAGLSLPQETPEAAAKEQRRRT----LYEVMALAAK 121
           G+   F+M+ +   F +AVE LA  AG+ +P+E  E+  + + R+     LY ++  AA 
Sbjct: 68  GNALGFIMDHDNLDFPQAVEELAKAAGMEIPRE--ESGRQHKPRQPTDSPLYPLLTAAAD 125

Query: 122 HFEATLQSRLGAKAR-GYLADREIGPATQKRFGLGYAAGERFNLKEALGKEGVSVADMVE 180
            +   L+S    KA   YL  R +     + FGLG+A     NL + L  + +    M++
Sbjct: 126 FYRQALKSHPARKAAVDYLKGRGLTGEIARDFGLGFAPPGWDNLYKHLSSDTLQQRAMID 185

Query: 181 AGLLIAGEDIPVPYDRFRDRVMFPITDLKGRVVAFGGRALEKDVPAKYLNSPETPLFHKG 240
           AGLLI   +    YDRFRDRVMFPI D +GR++AFGGR L  D P KYLNSPETP+FHKG
Sbjct: 186 AGLLIENAETGKRYDRFRDRVMFPIRDTRGRIIAFGGRVLGDDKP-KYLNSPETPVFHKG 244

Query: 241 SLLYNGFSARTAAQTGARVIAVEGYVDVIAMVEAGFGGAVAPLGTALTEEQLQLLWRMSE 300
             LY  + AR   +    +I VEGY+DVIA+ + G   AVA LGTA +EE ++ L+R+  
Sbjct: 245 QELYGLYEARKNNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHMKRLFRVVP 304

Query: 301 EPLLLFDGDKAGRRAAHRAIDLALPHLKAGRSLSFAALPEGQDPDDLIRRSGREAMEQVL 360
             L  FDGD+AGR AA RA++  LP L+ GR   F  LPEG+DPD L+R  G +A    +
Sbjct: 305 NVLFCFDGDQAGRNAAWRALEATLPCLQDGRRARFLFLPEGEDPDTLVRSEGTDAFRARI 364

Query: 361 AQ-ARPLAAELWARESENA---SLETPERRAALEGRLNEVVNAIGDETVRKHYRADLMGR 416
            Q A+PLA   + + +E A   SLE     A L   L + V      T+ +   +++ G 
Sbjct: 365 NQHAQPLADYFFQQLTEEADPRSLEGKAHMATLAAPLIDKVPGANLRTLMRQRLSEITGL 424

Query: 417 FNALMAPAERARPSGRREGWSPG------------------------FTPGR-GRGGKFP 451
            +  +     + P      + PG                        +TP + G GGK  
Sbjct: 425 NSEAVNQLVHSAPQEAPPAYDPGIDYDAMPDFADYHQPQQDYAPQQEWTPKKTGSGGKKW 484

Query: 452 GKPSAPPLAPRGQEIARSALVRGPMAALPRNEALLLFCLINHPFLLDEAGEEVSSLPFAN 511
            K        RG      A  R P A  P   A L   L++HP L ++  E+       +
Sbjct: 485 DKKPWDKNGKRGDRDQPRA-PRVPAAVEPPTLAALR-TLLHHPQLAEKV-EDAGHFAAED 541

Query: 512 PEADRLRRALIEA 524
               +L  AL+EA
Sbjct: 542 HSNTQLLVALLEA 554