Pairwise Alignments

Query, 464 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 445 a.a., cytochrome ubiquinol oxidase subunit I from Vibrio cholerae E7946 ATCC 55056

 Score =  417 bits (1072), Expect = e-121
 Identities = 202/421 (47%), Positives = 285/421 (67%), Gaps = 2/421 (0%)

Query: 4   DPVTLARMQFAFTVSFHVIFPAFTIGLSAFIATLELIWLKTGKDVFHRLARFWTKIFAVS 63
           D + L+R+QFA  +SFH++FP  TI L   +   +  +L+T    +  L  FW K+FA++
Sbjct: 3   DTLMLSRIQFAANISFHILFPTITIALGWILVFFKWRYLRTQVSEWLDLYYFWVKVFALT 62

Query: 64  FAMGVVSGIVLSYQFGTNWSRYAEFVGSVIAPLIGFEVLTAFFLEATFLGIMLFGWNRVP 123
           FA+GVVSGI +S+QFGTNW  + E VG+V  PL+G+EV+TAFF+EATFLG+MLFG  RVP
Sbjct: 63  FALGVVSGITMSFQFGTNWPGFMERVGNVAGPLLGYEVMTAFFMEATFLGVMLFGRGRVP 122

Query: 124 PWLHVLSCCVVAFGTFMSAFWILAANSWMQTPAGYEIRNGVGYPLDWLEIIFNPSFHWRL 183
            WLH LS  +VA GT +SAFWIL  NSWM TPAGYE+ +GV +   W E+IFNPS  +RL
Sbjct: 123 EWLHTLSTVLVAVGTSLSAFWILVLNSWMHTPAGYEVIDGVVHVTSWKEVIFNPSMPYRL 182

Query: 184 PHMLLAAYLTTSLVVLSVGARYLLAGKFKDESKVMMVMGIGMLAIVGPIQAFVGDSHGLN 243
            H LLA+ LT S ++  + A  +L       +K+ + + + + A+  P+Q  VGD HGLN
Sbjct: 183 AHTLLASALTASFLIAGISAYQVLRNAKHQAAKMGLKVAVSVAALAIPVQILVGDLHGLN 242

Query: 244 TAHYQPAKIAAVEAHWDSTKPAPLVLFAWPDEKAEKNLFEISIPHGASLMITHSLDGLFP 303
           T  +QPAKIAA+E  W + + APL+LFA P+E+   N F + IP+ ASL++TH ++G   
Sbjct: 243 TLEHQPAKIAAMEGVWQTERGAPLLLFALPNEETRSNDFALGIPNLASLILTHDMNGEIV 302

Query: 304 GLKDFPPQDRPPVFGPFFGFRAMVGVGVVMILLGWIGAWLIFKGRETTTRWYLVVTSWAW 363
           GL  F P D PPV   FFGFR MVGVGV+M+L+ W GAW +++ +     +   +    +
Sbjct: 303 GLDAFAP-DHPPVAPLFFGFRVMVGVGVLMLLVSWFGAWRVWRNKPLPKPYMYALIGMTF 361

Query: 364 PLGFIAILSGWIVTEQGRQPWVVEGLLRTEDAMSPLAGWTVGLSLTLFIIIYAVIFATGI 423
             G++A ++GW VTE GRQPW+V G+LRT +A++P+A  +VG+SLTL++I Y V+    +
Sbjct: 362 S-GWVATIAGWYVTEIGRQPWLVSGVLRTAEAVTPVASSSVGISLTLYLITYVVLLVAYV 420

Query: 424 H 424
           H
Sbjct: 421 H 421