Pairwise Alignments

Query, 291 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

Subject, 307 a.a., Branched-chain amino acid ABC-type transport system, permease components from Pseudomonas stutzeri RCH2

 Score =  153 bits (386), Expect = 5e-42
 Identities = 94/301 (31%), Positives = 156/301 (51%), Gaps = 15/301 (4%)

Query: 5   VQYILSGLAIGGIYALVALGFHIMWSSAKAVNFAHGDTLMIGGLLAVYLLAAGLPLGLAC 64
           +Q +++GL +G  YAL+A+G+ +++     +NFAHG+  MIG  +    +     +GL  
Sbjct: 8   LQQLINGLTVGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVTFIAIVGLSMMGLDA 67

Query: 65  LVAVAAGGL---------FGLVLERIAVRPFLSQQGSVGWMLTTIAVGIMVESFATIQTQ 115
           L  +  G           +G  +ER+A RP       +  +++ I + I +++   +   
Sbjct: 68  LPILMIGAFVAAMIVTSAYGYSIERVAYRPLRGSNRLIP-LISAIGMSIFLQNVVLLAQD 126

Query: 116 GYARPLPS--PG--VASSVHILGAGIYPQELVIPLVAVVAMLGLRALQRHTLVGRAMRAV 171
              + +P+  PG  V     + G  I   +++I +V  VAM GL      + +GRA RA 
Sbjct: 127 SKDKAIPNLMPGNLVIGESAMNGVVISYMQILIFVVTFVAMYGLTLFISRSRLGRACRAC 186

Query: 172 AHNKNAAALMGINVNAVVAFSFALAGLLGAAAGVLVAPVVQA-SAAMGVLPGLKGFAVAI 230
           A +   A L+GIN N+++A +F +   L A A VL++      +  +G L G+K F  A+
Sbjct: 187 AEDLKMANLLGINTNSIIALTFVIGAALAAVAAVLISMQYGVINPHIGFLAGIKAFTAAV 246

Query: 231 IGGITSAPGVVITGLVYGVMEKFVEGYISTAAREIIGFSLMILTLLVFPQGLFGKREVMK 290
           +GGI S PG ++ GLV GV E F         ++++ FSL+IL LL  P G+ G+ EV K
Sbjct: 247 LGGIGSIPGAMLGGLVLGVAEAFGADIFGDQYKDVVAFSLLILVLLFRPTGILGRPEVEK 306

Query: 291 V 291
           V
Sbjct: 307 V 307