Pairwise Alignments

Query, 430 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 394 a.a., gene transfer agent major capsid protein from Phaeobacter inhibens DSM 17395

 Score =  193 bits (491), Expect = 7e-54
 Identities = 118/329 (35%), Positives = 167/329 (50%), Gaps = 6/329 (1%)

Query: 100 AAAPADPEYSTAWGAFFREGEGEAQIKALNKAGPRAAMTVGSNPDGGYLAPVEWDRTITA 159
           AA      +  A  A+ R G+ +A ++ L+      AM    N DGGYL   +   ++ +
Sbjct: 67  AADAGTAPHQKALDAYLRSGD-DAALRGLDLDAK--AMNTTVNGDGGYLVDPQTAESVKS 123

Query: 160 RLKEISPIRQNAQVQSISKPGFTRVYNDRSVGSGWVAENAARPATSTPQVAPLTFTPGEL 219
            L   + IR  A V ++    +  + +   VG GW  E  A   TSTP +  +T    EL
Sbjct: 124 VLSSTASIRAVASVVTVEATSYDVLIDHGDVGHGWANETGAVTETSTPVIDRITIPLHEL 183

Query: 220 YAFPFASQTLLEDAEVDIEGWLASEVETEFSRQENIAFLSGDGSGKPYGILTYVTGAANA 279
            A P ASQ LL+D+  DIEGWLA  +  +FSR E  AF+ GDG+ KP GIL +   A ++
Sbjct: 184 SALPKASQRLLDDSAFDIEGWLAGRIADKFSRAEAAAFIMGDGNDKPTGILYHPVVANDS 243

Query: 280 ARHPWGAIEVVNSGAAAAL-TSDGIITLIYTLPDAFRAGAKMYMNRLTRMAVRKLKDGQG 338
               WG I  V +G    +   D II L+Y L   +RA A   MN  T   +RKLKD  G
Sbjct: 244 --WSWGNIGYVTTGVEGDIGDGDAIIDLVYALGAQYRANASFVMNSKTAGLLRKLKDADG 301

Query: 339 NYLWQPSYQVGQPSTLAGEAIVDVPDMPNVAAGNIPLLYGDMSATYLVVDRVGISVLRDA 398
            +LW       +P+ L G  +V   DMP+       + +GD +A Y + +R  + VLRD 
Sbjct: 302 RFLWSDGLAAAEPARLMGYPVVIAEDMPDADVNGYAVAFGDFAAGYTIAERPDLRVLRDP 361

Query: 399 LTNKPYVGFYTRKRVGGGVQNPEPMKAMK 427
            + KP+V FY  KRVGG V +   +K +K
Sbjct: 362 FSAKPHVLFYATKRVGGDVSDFAAIKLLK 390