Pairwise Alignments

Query, 496 a.a., Periplasmic serine endoprotease DegP from Xanthobacter sp. DMC5

Subject, 456 a.a., serine endoprotease DegQ from Vibrio cholerae E7946 ATCC 55056

 Score =  264 bits (674), Expect = 6e-75
 Identities = 164/425 (38%), Positives = 246/425 (57%), Gaps = 33/425 (7%)

Query: 41  GKGPDTVADVAEKVMDAVVNISTSQNVAPSRSVPAPQLPPGSPYEDFFDEFFKRRPEDGS 100
           G+   ++A + EKV  AVV+I+        + +P           D F  FF   P+  +
Sbjct: 35  GEQIPSLAPMLEKVTPAVVSIAVEGTQVSRQRLP-----------DQFRFFFG--PDFPT 81

Query: 101 EQ-RSRRVSSLGSGFVIDPS-GFIVTNNHVISDADEIFANFNDGSKLKAEVIGRDTKTDL 158
           EQ + R    LGSG +I+   G++VTN HVI+ A++I     DG +  AE++G D  +D+
Sbjct: 82  EQLQERPFRGLGSGVIINADKGYVVTNYHVINGAEKIRVKLYDGREFDAELVGGDEMSDV 141

Query: 159 ALLKVNPPKPLVAVKFGDSEKLRVGDWVMAIGNPFGLGGTLTVGVVSARNRD-INSGPYD 217
           ALLK+N  K L  ++  DS+KLRVGD+ +AIGNPFGLG T+T G+VSA  R  +N   ++
Sbjct: 142 ALLKLNKAKNLTEIRIADSDKLRVGDFAVAIGNPFGLGQTVTSGIVSALGRSGLNIENFE 201

Query: 218 NFIQTDAAINRGNSGGPLFNMEGEVIGINTAIISPSGGSIGIGFAVPSATAQPVIAQIEQ 277
           NFIQTDAAIN GNSGG L N+ GE+IGINTAI+ P+GG++GIGFA+PS   + +  QI +
Sbjct: 202 NFIQTDAAINSGNSGGALVNLNGELIGINTAILGPNGGNVGIGFAIPSNMMKNLTDQILE 261

Query: 278 FKEVRRGWIGVRIQPVTEDIAESLGLGKPRGALIGVVTENSPAAQGGIKAGDVIVKFNGR 337
           F EV+RG +GV+   +T ++A++LG    +GA +  V  +S A + GIKAGD+I   NG+
Sbjct: 262 FGEVKRGMLGVQGGEITSELADALGYESSKGAFVSQVVPDSAADKAGIKAGDIITSLNGK 321

Query: 338 DIKEVRDLTRTVADTMADSEVEVVVIRKGKEETLRVKVARMPEDDKPEGSKPAPEAQKVP 397
            I    +L   VA   A   + + V+R GK + + V +       + + +K   E+    
Sbjct: 322 KIDTFSELRAKVATLGAGKTITLGVLRDGKNQNIDVTLG------EQQNAKTKAESLH-- 373

Query: 398 PRKALGIELSAMSDDLRKRYKIKSEISGVVITDVDRSSAASDKGLKAGQVIVQVGQEAVA 457
            +   G ELS  +D           I GV +T+V + SAA    L+   +I+ V ++ V 
Sbjct: 374 -QGLSGAELSNTTD--------SDPIQGVKVTEVQKGSAAESYQLQKDDIIIGVNRKRVK 424

Query: 458 SPADV 462
           + A++
Sbjct: 425 NIAEL 429



 Score = 34.7 bits (78), Expect = 7e-06
 Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 2/95 (2%)

Query: 399 RKALGIELSAMSDDLRKRYKIKSEISGVVITDVDRSSAASDKGLKAGQVIVQVGQEAVAS 458
           R  LG++   ++ +L      +S   G  ++ V   SAA   G+KAG +I  +  + + +
Sbjct: 267 RGMLGVQGGEITSELADALGYESS-KGAFVSQVVPDSAADKAGIKAGDIITSLNGKKIDT 325

Query: 459 PADVEKQIDALRKAGKRSALFLVSDGEGKQEFVTV 493
            +++  ++  L  AGK   L ++ DG+ +   VT+
Sbjct: 326 FSELRAKVATL-GAGKTITLGVLRDGKNQNIDVTL 359