Pairwise Alignments

Query, 508 a.a., Long-chain-fatty-acid--CoA ligase from Xanthobacter sp. DMC5

Subject, 549 a.a., AMP-binding protein from Methanococcus maripaludis S2

 Score =  174 bits (442), Expect = 6e-48
 Identities = 145/508 (28%), Positives = 232/508 (45%), Gaps = 47/508 (9%)

Query: 35  TRAAFDALADAVARGLLRQGLVRGDRIAILAANRPDYVAVVMGAMRAGIVPVPVNFKFPA 94
           T   FD   D +A+GLL  G+ +GD I I A N PD++  +    + G+V V VN  + +
Sbjct: 35  TYKEFDERTDLLAKGLLEIGIKKGDHIGIWARNVPDWLTFMFATAKIGVVLVTVNTAYKS 94

Query: 95  ATIADVIADCGAR-LVIYDGERRA----LLPATPPE------------------GIAFVD 131
             +A V+     + L I D  R      +L    PE                   + +V 
Sbjct: 95  HELAYVMKQSDMKALAIIDSFRDVNYLEILYELVPELKTSQRGKLNSEEFPYLKNVIYVG 154

Query: 132 FDG-TGPGTLAGLLDPGPF---EPVVPAP-----DEPALSLYTSGSTGRPKGVLLSHAA- 181
            +   G      L+  G +   E ++ A      D+     YTSG+TG PKGV+L+H   
Sbjct: 155 QEKHRGMYNTTELMLLGNYVSDEKLIEAKKGLDSDDVINMQYTSGTTGFPKGVMLTHKNI 214

Query: 182 --HRWVADTRRTETDLSRERMLIAAPLYHMNALALALLACAS-GSTAVVLPQFRAVPYIE 238
             + +    ++  T+   ER+ +  PL+H   + L +LA  + G T V+L  F  +  + 
Sbjct: 215 LNNGYYIGEKQKFTE--EERLCLPVPLFHCFGIVLGVLALLTHGGTLVMLEIFDPLLVLA 272

Query: 239 AIASHGCTFLTAVPPMIAMMLREKAALAQADLSGVRMLRMGSAPVTDSLAQQIRQLLPNA 298
           AI    CT +  VP M              DLS +R   M  +       +++   +   
Sbjct: 273 AIQKEKCTAVYGVPTMFIAEFSHPM-FEMFDLSSLRTGIMAGSTCPIEAMKKVMSDMYMR 331

Query: 299 AIINAYGTTEGGPI-VFSGHPDGRPVPMGSVGYPHPQVAVRLVGPEAPET------GELE 351
            I  +YG TE  P+   +   D     + SVG   P   V+++ PE  ET      GE+ 
Sbjct: 332 EITISYGLTEASPVFTMTSVDDPFEKRVESVGKAMPHCEVKIIDPETGETLAPGNVGEIC 391

Query: 352 MKSPAVMLGYHNRPDVRSP-LTADGFYRTGDVFRRDADGFYYFLGRTDDMFVCGGENIFP 410
            +   VM GY+  P+  +  +  DG+  +GD+   D DG+Y  +GR  DM + GGENI+P
Sbjct: 392 CRGYNVMKGYYKMPEKTAEVIEKDGWLHSGDLAVEDEDGYYKIVGRIKDMIIRGGENIYP 451

Query: 411 GEVEAVLDRHPQVLQSCVVPVPDDIKGEKPVAFVVRRAGADISEEALKQFMLANAPAYQH 470
            E+E  L   P +  + VV +PD+  GE   AFV+ + G +I EE ++ F L     Y+ 
Sbjct: 452 REIEEFLYTMPGINDAQVVGIPDEKYGEIVGAFVIPKEGYEIKEEDVRDFALEKIARYKV 511

Query: 471 PRRVWFLDQMPLASTNKIDRSALKRRAV 498
           P+ V+ +++ P+ ++ KI +  L   AV
Sbjct: 512 PKHVFVVEEFPMTASGKIQKFKLTELAV 539