Pairwise Alignments

Query, 742 a.a., Secretin XpsD from Xanthobacter sp. DMC5

Subject, 559 a.a., pilus (MSHA type) biogenesis protein MshL from Vibrio cholerae E7946 ATCC 55056

 Score =  104 bits (260), Expect = 1e-26
 Identities = 102/399 (25%), Positives = 169/399 (42%), Gaps = 28/399 (7%)

Query: 329 YGEARQTARVLNELFNGTSSQGLDQASNQIAPGSGSSASSNGGGSNGPMSVQQRLGQTPT 388
           Y + ++T R L  +  GT +      +N  +  S SS+ S+   S+G  S          
Sbjct: 152 YLQFKRTGRSLTSITTGTITN--TDTNNSNSSSSSSSSISSNSSSDGSSS-----NSNSN 204

Query: 389 QNQGQGGQNAQPVNRGETDNELQGGSGPSGGGGAILSGIRITADQVNNSLLIYASQENYR 448
           ++  +GG   +  N  +    L+       GG     G  +  +     L + A  +  R
Sbjct: 205 RSDARGGTEIETTNESDFWPLLEKAVAQLLGGSG---GQTVIVNPQAGVLTLRAYPDEIR 261

Query: 449 IIERTL-LQLDQPQLQVAIEATVAEVTLNDQLAYGVQFFLTSKDLGLGKNNGSAVNTLSS 507
            +   L +   +   QV +EA + EVTL+D    G+ +       G     GS   +++ 
Sbjct: 262 QVNEFLGISQQRMHRQVILEAKILEVTLSDGYQQGINWSKAFSSNGANYKIGSG--SITQ 319

Query: 508 EITNQAINRVLPGF----NLLIGRENQP------KMILDALHTVTDVKVLSNPSVVVVDN 557
           +     I  VLPG     NLL G+ N          ++  + T  D+ VLS+P V   +N
Sbjct: 320 DSNGNPITSVLPGLDAIGNLLGGQSNVVISSGSFDAVISFMATQGDLNVLSSPRVTASNN 379

Query: 558 QKATLQVG-DEVPVSTGSATVLTSSNTVVN---TIEYKNTGIILHVTPRVNVNGQVRLDI 613
           QKA ++VG DE  V+  S+ V T  N   +   T+    +GI L VTP+++  G V L +
Sbjct: 380 QKAVIKVGTDEYYVTDLSSVVGTGDNAQASPDITLTPFFSGISLDVTPQIDDQGNVLLHV 439

Query: 614 EQEISNVTKQPTANGSSSDGSTLTPTVSQ-RRVKSTIAVTSGQTVLLAGLISERSDGVRQ 672
              +  V +Q       S+   L    S  R   S I    G  V++ GL+   +     
Sbjct: 440 HPAVIEVEQQTKKILYRSEEIELPLARSSIRESDSVIRAKDGDVVVIGGLMKSNTVDQVS 499

Query: 673 GVPVLDQIPGVGDAFAHKDTTVKRTELIIFIRPQIIRDN 711
            VP L  +P +G  F +     ++TEL+I ++P ++  N
Sbjct: 500 KVPFLGDVPALGHLFRNTTKLTQKTELVILLKPTVVGVN 538