Pairwise Alignments

Query, 742 a.a., Secretin XpsD from Xanthobacter sp. DMC5

Subject, 776 a.a., type II and III secretion system protein:NolW-like protein from Pseudomonas syringae pv. syringae B728a

 Score =  338 bits (868), Expect = 5e-97
 Identities = 233/755 (30%), Positives = 372/755 (49%), Gaps = 50/755 (6%)

Query: 8   AAILSGCSGIMDDTKP---------QSTFDQVRNIDLSPKPMQPVAQPQQPTDNRQPIEY 58
           A  L GC+   D   P         Q T  Q   +D  P+  +P  +P        P   
Sbjct: 23  AVALGGCASQSDTLDPDNGMLQEALQGTGSQRPPVD--PRSERPPVEPPSQQTTSSPQRQ 80

Query: 59  FATPGAQPVTDPAAVGAAGTAQRGADGGYDLNFENTPVTTVAKVVLTDILGANVIIDPRV 118
                 + +  PAA  AA  A+ G       NF N P+  V   ++ D+L  N  I   V
Sbjct: 81  IIKGNQRFIRQPAAAPAARQAETG---DIVFNFTNQPIQAVINSIMGDLLHENYSIAQGV 137

Query: 119 QGTISLSSARPVARTDLAYVLESALRSNGIALVKDASGYQLMPLTEA-AGSGATDVGTSR 177
           +G +S S+++PV +     +LE+ L     A++K  + Y ++P  +A AG    ++  ++
Sbjct: 138 KGDVSFSTSKPVNKQQALSILETLLSWTDNAMIKQGNRYVILPSNQAVAGKLVPEMRVAQ 197

Query: 178 PEPGYGVSVVPLRYVSAETLMPVIDSFATRAGMVRVDPGRNVLLIQGTAQERQAAINTAL 237
           P  G    + PLRY+SA  +  ++  FA     + VDP RNVL + GT +E     +T  
Sbjct: 198 PSAGMSARLFPLRYISATEMQKLLKPFARENAFLLVDPARNVLSLAGTPEELANYQDTID 257

Query: 238 SFDADWMRGQSVGIYPLRNSAPEPLIAELETLLDAGEGGLSHKMVKFQAINRMNSVMVVA 297
           +FD DW++G SVG++ L+ ++   L+ EL+ +     G     MV+F  I R NSV+ ++
Sbjct: 258 TFDVDWLKGMSVGVFGLQRASVGELMPELQKMFGPESGMPLAGMVRFLPIERTNSVVAIS 317

Query: 298 KKPDLLRTAATWIERLDR-SDSSVGVRVYRLRYGEARQTARVLNELFNGTSSQGLDQASN 356
            +P+ L     WI  +D    +   + VY +R  +A   A+ L +++ GT +   D +  
Sbjct: 318 SQPEYLHEVGEWIHTIDEGGGNEPQMYVYDVRNMKATDLAKYLRQIY-GTGAI-KDDSPA 375

Query: 357 QIAPG----SGSSASSNGGGSNGPMSVQQRLGQT-PTQNQGQGGQNAQPVNR-------- 403
           ++APG    + SS +S+GG   G MS    LG        G G  N+Q +N         
Sbjct: 376 KVAPGLRTTTLSSLNSSGGSGVGGMSSSNGLGSNGGGMGNGGGFGNSQSMNNSQNSADSE 435

Query: 404 ----------GETDNELQGGSGPSGGGGAILSGIRITADQVNNSLLIYASQENYRIIERT 453
                      ++D+  Q GSG SG   ++ +  RITA + +N LL+      ++ IE  
Sbjct: 436 SEGDDQGGGDSDSDSASQDGSGSSGASKSLDASTRITAQKSSNQLLVRTRPAQWKEIESA 495

Query: 454 LLQLDQPQLQVAIEATVAEVTLNDQLAYGVQFFLTSKDLGLGKNNGSAVNTLSSEITNQA 513
           + +LD P LQV IE  + EV L  +L  GVQ++L  +  G     G+  NT  S+     
Sbjct: 496 IKRLDNPPLQVQIETRILEVKLTGELDMGVQWYL-GRLAGNSGTTGNVTNTAGSQGAIGT 554

Query: 514 INRVLPGFNLLIGR--ENQPKMILDALHTVTDVKVLSNPSVVVVDNQKATLQVGDEVPVS 571
               L   +        N  ++ L AL T    +VLS PS+VV++NQ+A +QVGD +P+S
Sbjct: 555 GGAALASTDAFFYSFVSNNLQVALRALETNGRTQVLSAPSLVVMNNQQAQIQVGDNIPIS 614

Query: 572 TGSATVLTSSNTVVNTIEYKNTGIILHVTPRVNVNGQVRLDIEQEISNVTKQPTANGSSS 631
             S    T++ T ++++EY  TG+IL V PR+N  G V +DI+Q++S+      A+ S +
Sbjct: 615 QTSINTNTNTGTTLSSVEYVQTGVILDVVPRINPGGLVYMDIQQQVSD------ADSSGT 668

Query: 632 DGSTLTPTVSQRRVKSTIAVTSGQTVLLAGLISERSDGVRQGVPVLDQIPGVGDAFAHKD 691
             +   P +S R V + +A  SGQTVLL GLI + +      VP L +IPG+   F +  
Sbjct: 669 TDANGNPRISTRSVATQVAAQSGQTVLLGGLIKQDNAETVNAVPYLGRIPGLRWLFGNTS 728

Query: 692 TTVKRTELIIFIRPQIIRDNMDAHTVAEELRAKLK 726
            +  RTELI+ I P++I  +  A  V ++ R +++
Sbjct: 729 KSKDRTELIVLITPRVITSSSQARQVTDDYRQQMQ 763