Pairwise Alignments

Query, 337 a.a., Putative amino-acid ABC transporter-binding protein YhdW from Xanthobacter sp. DMC5

Subject, 342 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Pseudomonas stutzeri RCH2

 Score =  398 bits (1022), Expect = e-115
 Identities = 193/336 (57%), Positives = 248/336 (73%), Gaps = 1/336 (0%)

Query: 3   TILALMAGAALALGATAATAQTLKTVKDRGELVCGVSKGLPGFSAQDASGKWTGFDVDVC 62
           T+  L A + L +   A    TL  V+ +G + CG+S GLPGFS  DA GK+ G DVD+C
Sbjct: 7   TLAVLGAASLLGISGLAQAGATLDAVQKKGFVQCGISDGLPGFSFADAKGKYQGIDVDIC 66

Query: 63  KALAAAIFDDANKVKYVPLTADERFPALTKGDIDVLSRNSTWTLEREAKLGLLFTAINYY 122
           +A+AAA+F DA+KVKY PLTA ERF AL  G++DVLSRN+TWT  R+A +GL FT + YY
Sbjct: 67  RAVAAAVFGDASKVKYSPLTAKERFTALQSGEVDVLSRNTTWTSSRDAAMGLNFTGVTYY 126

Query: 123 DGQGFLVRDARKVTSALELDKSKVCVQAGTTAESNTKDYFAANGMTLELVTLPTSGELVK 182
           DGQGFLV     V+SA ELD + VC+QAGTT E N  DYF ANG     +T  TS E  K
Sbjct: 127 DGQGFLVNKELGVSSAKELDGATVCIQAGTTTELNLSDYFRANGHKYTPITYDTSDESAK 186

Query: 183 AYDEGKCDTLTTDVSQLYALRLTMAKPGDHIVLPDVISKEPLGPVVRQGDDQWFNLVKWT 242
           + + G+CD LT+D SQLYA R+ +AKP D++VLP+VISKEPLGP VRQGD++WF++V+WT
Sbjct: 187 SLESGRCDVLTSDQSQLYAQRIKLAKPADYVVLPEVISKEPLGPAVRQGDEEWFDIVRWT 246

Query: 243 VYAMINAEELGVATNTLDAAIKSQK-PEVKRLVGNEGNYGEELGVTKDFVVRIVKAVGNY 301
           ++AM+NAEELGV +  ++   KS K P+V RL+G EG YG++L + KD+ V+IVK VGNY
Sbjct: 247 LFAMLNAEELGVTSANVEEMAKSTKNPDVARLLGAEGEYGKDLKLPKDWAVQIVKQVGNY 306

Query: 302 GESFERNVGAASKLGIPRGINQLWSMGGIQYAPPVR 337
           GE F+RNVGA S+L I RG+N LW+ GG+QYAPPVR
Sbjct: 307 GEIFDRNVGAGSELKIERGLNALWNNGGLQYAPPVR 342