Pairwise Alignments

Query, 210 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 304 a.a., LysM domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 80.5 bits (197), Expect = 3e-20
 Identities = 53/132 (40%), Positives = 68/132 (51%), Gaps = 8/132 (6%)

Query: 78  IVIHTNE-RFLYLVQGDNRAMRYGIGVGRDGFQW--SGLKTIERKAEWPDWTPP----SE 130
           IVI+  E R  Y  +G        IG+G+ G     + + +++RK   P WTP      E
Sbjct: 98  IVINVAEMRLYYYPKGKKTVEVLPIGIGQIGKDTPENWVTSVQRKRANPTWTPTPRIRKE 157

Query: 131 MIQRQPYLPRFMAGGPGNPMGARALYIGGTVYRIHGTNQPQTIGYAVSSGCFRLVNSEII 190
              R   LP     GP NPMG  ALYIG  +Y IHGTN    IG  VS GC RL + +I 
Sbjct: 158 YAARGEILPAVWPAGPDNPMGLYALYIGN-LYAIHGTNASFGIGLRVSQGCVRLRHDDIE 216

Query: 191 DLYSRVPVGTKV 202
            L+  VP+GT+V
Sbjct: 217 HLFKTVPIGTRV 228