Pairwise Alignments

Query, 217 a.a., Transcriptional activator protein ExaE from Xanthobacter sp. DMC5

Subject, 209 a.a., DNA-binding nitrate/nitrite response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 95.5 bits (236), Expect = 6e-25
 Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 7/207 (3%)

Query: 3   SVLLIDDHPIVLQG-CRHLLEDAGVSDLMEAQTALAGYRLFRRKRPDVVIVDLALNGSGL 61
           SVL++DDHP++ +G C+ +  D   S   E  + L          PD+V++DL  N  G+
Sbjct: 6   SVLVVDDHPLLRKGICQLITSDPDFSLFGEVGSGLDALSSVATDEPDIVLLDL--NMKGM 63

Query: 62  AGLALVRRLRAQAARMPILVFSMHADPVIASRALEAGATGYLLKDTSPDDLLEAFEKVRR 121
            GL  +  +R +     I++ ++        R L AGA GYLLKDT PD LL+  +    
Sbjct: 64  TGLDTLNAMRQEGVTSRIVILTVSDAKQDVIRLLRAGADGYLLKDTEPDLLLDKLKNTMS 123

Query: 122 GQPYISHDLALEV-ALLGTRGRSGVMADLTPRELQALALLAEGKAYGQIADELGVSYKTV 180
           G   IS ++A  +  L         ++ LTPRELQ L  LAEG +   I++ L +S  TV
Sbjct: 124 GHRVISEEVAEYLYELKNAADEQEWVSSLTPRELQILQQLAEGLSNRMISEHLHISEGTV 183

Query: 181 ANTCSQLKAKLGATNLAELIHRAIQYV 207
                 L  K  A +  E+   A++Y+
Sbjct: 184 KVHVKNLLRKANAKSRTEM---AVRYL 207