Pairwise Alignments

Query, 300 a.a., Glycine cleavage system transcriptional activator from Xanthobacter sp. DMC5

Subject, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

 Score =  116 bits (290), Expect = 7e-31
 Identities = 84/297 (28%), Positives = 133/297 (44%), Gaps = 18/297 (6%)

Query: 6   SSNLPSLRGLAALDALARHKRQGAAAEALGISRSALSHRIADLEAELGARLVTRSGRVSM 65
           S  LP L  L   +A ARH     AAE L ++++A+SH+I  LE  LG +L  R  R  +
Sbjct: 2   SRRLPPLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRSLL 61

Query: 66  LTDEGTALLAAMGDAIGRIEAAVAPLQRRLRQ--IRLSTVNTLAANWLLPRLPRFQRAHP 123
           LT+EG +    + D    +  A   L  R  +  + +S   + A  WL+PRL  F +  P
Sbjct: 62  LTEEGQSYFLDIKDIFSSLAEATDKLLERSEKGALTISLPPSFAIQWLVPRLADFNQQEP 121

Query: 124 DMEIAVLTTQRVVDLD----GEDVDCAIRNGMGDWPGTEARLLFRETLVPAAAPGLALGR 179
           D+++ +    + VD+D     +DVD AI  G G WPG  A  L++E L+P  +P L LG 
Sbjct: 122 DIDVRI----KAVDMDEGSLTDDVDVAIYYGRGSWPGLRADKLYQEFLIPLCSPALLLGN 177

Query: 180 PS-------GWPVIRARARFRDWPLWWQQAGQKGEAPAGGMVVENRAQALEAALAGAGVV 232
                     +  +      +DW  + ++ G        G +  +    L+AA  G GV 
Sbjct: 178 KPMEKLSDLAYHTLLHDTSRKDWKQFAKENGLDNVNVNHGPIFSHSTMVLQAAAHGQGVA 237

Query: 233 LTDARYLDTHLAAGRL-RVLGPVIELDTGFHFVRSRAPRNPRNVEALARWLEDEGRA 288
           L +       + AGRL      V+  +  F+ V      +   +     W+  + R+
Sbjct: 238 LGNNVLAQPEIDAGRLIAPFDEVLMTNNAFYVVCHEKQADMGRIATFRDWMLKKARS 294