Pairwise Alignments

Query, 307 a.a., ATP-dependent zinc metalloprotease FtsH from Xanthobacter sp. DMC5

Subject, 788 a.a., CDC48 family AAA ATPase from Methanococcus maripaludis S2

 Score = 84.0 bits (206), Expect = 1e-20
 Identities = 65/199 (32%), Positives = 104/199 (52%), Gaps = 15/199 (7%)

Query: 58  ESVGLKPRATALLYGPPGTGKTTLAHHLAARLGLALVTVQAERLMTPQFGGSSNNIGELF 117
           + +G++P    LL GPPGTGKT LA  +A   G    T+    +M+   G +  N+ ++F
Sbjct: 204 DKLGIEPPKGVLLAGPPGTGKTLLAKAVANEAGANFYTINGPEIMSKYVGETEENLRKIF 263

Query: 118 DGLAEAEHGCVLLLDEIDSIGSVRLSDDSSAGRERNMV--LTTLLTRVEAFRG--MAIAA 173
           +  AE     ++ +DEID++   R  D++S   ER MV  L TL+  +E+ RG  + +AA
Sbjct: 264 EE-AEENSPSIIFIDEIDAVAPKR--DEASGEVERRMVAQLLTLMDGLES-RGQLVILAA 319

Query: 174 TNRKDQLDPALWR--RFGMQISVDLPDGEERFAIL-----NRYAAPFDFGEDGLDILTDL 226
           TNR D +D AL R  R   +I++ +PD   R  IL     N    P     D + IL +L
Sbjct: 320 TNRPDSIDMALRRPGRLDREITIGIPDRHGRNEILQIHTRNMPLQPDYEKSDVISILNEL 379

Query: 227 TQGASPALLRQLMEGLKRA 245
                 + +  L++ +++A
Sbjct: 380 VGEYDRSKIESLVKLVEKA 398



 Score = 78.2 bits (191), Expect = 6e-19
 Identities = 79/264 (29%), Positives = 119/264 (45%), Gaps = 19/264 (7%)

Query: 46  EWLTELRARAELESVGLKPRATALLYGPPGTGKTTLAHHLAARLGLALVTVQAERLMTPQ 105
           EW   ++ +   E +G++P    LL+GPPGTGKT LA  +A       ++V+   + +  
Sbjct: 524 EW--PIKNKEMFERMGIRPPKGVLLFGPPGTGKTLLAKAVANESEANFISVKGPEIFSKW 581

Query: 106 FGGSSNNIGELFDGLAEAEHGCVLLLDEIDSIGSVRLSDDSSAG---RERNMVLTTLLTR 162
            G S   I E+F    +A    V+  DEIDS+   R  D  S+G   +  N +LT L   
Sbjct: 582 VGESEKAIREIFRKARQAA-PTVIFFDEIDSVAPKRGMDFGSSGVTEKVVNQLLTELDGL 640

Query: 163 VEAFRGMAIAATNRKDQLDPALWR--RFGMQISVDLPDGEERFAILNRYAAPFDFGED-G 219
            E    + IAATNR D LD AL R  R    + V +P+   R  I   +      G+D  
Sbjct: 641 EEPKDVVIIAATNRPDILDQALLRPGRLDRIVLVPIPNETARLEIFKVHTKGMPIGKDVN 700

Query: 220 LDILTDLTQGASPALLRQLMEGLKRALVLHPRLGLNIDDVAV-----VFRAITSAVAPHP 274
           L+ L   T+G + A +  +    + A ++  R  +N + V        F+ I  +V    
Sbjct: 701 LEKLAKETKGYTGADIEAV---CREAAMIALRENINSEHVESRHFDGAFKRIAPSVKDDD 757

Query: 275 DLPQPPLWKAFG--AHTSQIRKIP 296
                 L K +G  A  S+I K P
Sbjct: 758 MDEYKDLAKEYGQNAGVSEIEKGP 781