Pairwise Alignments

Query, 307 a.a., ATP-dependent zinc metalloprotease FtsH from Xanthobacter sp. DMC5

Subject, 680 a.a., ATPase, AAA family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 74.7 bits (182), Expect = 6e-18
 Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 5/160 (3%)

Query: 69  LLYGPPGTGKTTLAHHLAARLGLALVTVQAERLMTPQFGGSSNNIGELFDGLAEAEHGCV 128
           +L GPPGTGKT   HHLA   G  L+ ++   +++   G S  NI  LF      +   +
Sbjct: 480 MLSGPPGTGKTAWVHHLAETHGFELMHIKCSDVLSKYVGDSEQNIARLFRDAHRQQK--L 537

Query: 129 LLLDEIDSIGSVRLSDDSSAGRERNMVLTTLLTRVEAFRGMAIAATNRKDQLDPALWRRF 188
           +L+DE+DS+ S R   DS+       ++  L++++E       AATN    +D A+ RRF
Sbjct: 538 MLIDEVDSLLSKR---DSAQALHEVQLVNELISQLECNTLPVFAATNALASIDSAVMRRF 594

Query: 189 GMQISVDLPDGEERFAILNRYAAPFDFGEDGLDILTDLTQ 228
             +++ D    ++R A+  +         + +  L  L Q
Sbjct: 595 DFKLACDYLTSDQRQALYRQVLGIQRLNHEEVSTLNSLNQ 634



 Score = 54.3 bits (129), Expect = 8e-12
 Identities = 50/176 (28%), Positives = 77/176 (43%), Gaps = 21/176 (11%)

Query: 51  LRARAELESVGLKPRATALLYGPPGTGKTTLAHHLAARLGLALVTVQAERLMTPQFGGSS 110
           L A  +  SVG+      LLYG  GTGKT LA  LA  +   L+ VQ+++L+  Q+   S
Sbjct: 217 LAAITKKPSVGVN----ILLYGKAGTGKTELARTLAKTIKRNLLEVQSQQLIGSQYRSDS 272

Query: 111 NNIG--------ELFDGLAEAEHGCVLLLDEIDSIGSVRLSDDSSAGRERNMVLTTLLTR 162
                        L  GL    +  +LL+DE +++    +  D    +E+      L+  
Sbjct: 273 ITKATSIRLVHLSLLQGLLAHSNDSLLLVDECEAL---FVQADEQYSKEQ------LMQA 323

Query: 163 VEAFRGMAIAATNRKDQLDPALWRRFGMQISVDLPDGEERFAILNRYAAPFDFGED 218
           +E     AI  TN    L+P+  RRF + + V +PD    + I      P    +D
Sbjct: 324 LEQNPVPAIWITNHVGLLEPSFIRRFKLVMEVPVPDEPFAYTINEHLLTPLKVSQD 379