Pairwise Alignments

Query, 623 a.a., Sialic acid TRAP transporter permease protein SiaT from Xanthobacter sp. DMC5

Subject, 426 a.a., TRAP transporter, DctM subunit from Pseudomonas stutzeri RCH2

 Score =  206 bits (523), Expect = 2e-57
 Identities = 124/416 (29%), Positives = 211/416 (50%), Gaps = 3/416 (0%)

Query: 205 IFFVGLVGAMVLAGIPIAFAFATATFGYIALTTRLPHSVVIGRMDEGMSHFVLLSVPLFV 264
           +  +G    ++L  +P+A++   AT    A    +P   V+ ++  G++ F LL++P FV
Sbjct: 4   VVLLGSFIVLILLRVPVAYSLGLATL-VGAWWIDIPLHAVMIQIAGGVNKFSLLAIPFFV 62

Query: 265 FLGVLIEMTGMARAMLAFLASLLGHVRGGLQYVLVGAMYLVSGISGSKAADMAAIAPVLL 324
             G ++   GMAR ++AF   L+G VRGGL  V + A      ISGS  AD A++  VL+
Sbjct: 63  LAGAIMAEGGMARRLVAFAGVLVGFVRGGLSLVNITASTFFGAISGSSLADTASVGSVLI 122

Query: 325 PEMEKRGADRGELLALLAATGAQTETIPPS--LVLITIGSVTGVSIAALFAGGLMPALVV 382
           PEMEK+G  R    A+  +   Q    PPS   V+ ++ +   VSIAALF  G+ P L++
Sbjct: 123 PEMEKKGYPREFSTAVTISGSVQALLTPPSHNSVIYSLAAGGTVSIAALFVAGIGPGLLL 182

Query: 383 GALLCCVVWLRSRKDDLSGVRRASFGEIAKALVVALPAIALPFIIRAAVIEGVATATEVS 442
            A +  +  L +RK +          +  K  V AL  +    II   ++ GV TATE +
Sbjct: 183 SATMATLCLLFARKRNYPKGEVVPLRQALKICVEALWGLMTMVIILGGILSGVFTATESA 242

Query: 443 TIGIAYAVLAGLLIYRRFDWRRLYPMLVDTAALSGAILLIIGAATGMAWALTQSGFSAAL 502
            + + +A    + IYR + W  L  ML  T      ++++I  A    + +T     + +
Sbjct: 243 AVAVVWAFFVTMFIYRDYKWSELPRMLHRTVRTLSIVMILIAFAASFGYIMTLMQIPSKI 302

Query: 503 AHMMTSLPGGAVGFMLVSLVAFIVLGSLLEGIPAIVLFGPLLFPIARQVGVNEVHYSMVV 562
                +L       ++      +VLG+L++  P I++  P+L P+    GV+ VH+ M++
Sbjct: 303 TTAFLALSDNRYVILMCINFMLLVLGTLMDMAPLILILTPILLPVVVSFGVDPVHFGMIM 362

Query: 563 ILAMGIGLFAPPFGVGYYAASAISRIRPDEGMRPMIGYIAALFIGTLIVAAVPWIS 618
           ++ +GIGL  PP G   +  +AI ++  +  ++ ++ + AALF   + V  +P IS
Sbjct: 363 LVNLGIGLITPPVGAVLFVGAAIGKVTIENTVKALLPFYAALFAVLMAVTYIPMIS 418