Pairwise Alignments

Query, 623 a.a., Sialic acid TRAP transporter permease protein SiaT from Xanthobacter sp. DMC5

Subject, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  176 bits (446), Expect = 2e-48
 Identities = 117/403 (29%), Positives = 205/403 (50%), Gaps = 30/403 (7%)

Query: 201 LNLLIFFVGLVGAMVLAGIPIAFAFATATFGYIALTTRL------PHSVVIGRMDEGMSH 254
           + +++FFV L    +L G P+AF     TFG IAL   L        + +  R+   M +
Sbjct: 2   IGIVMFFVALFA--LLLGFPVAF-----TFGGIALIFGLWAEGIEMFAFMPYRIQSIMEN 54

Query: 255 FVLLSVPLFVFLGVLIEMTGMARAMLAFLASLLGHVRGG--LQYVLVGAMYLVSGISGSK 312
            VL++VPLFVF+G++++ T +A  +L  +  L G + GG  +  VLVG   L++  +G  
Sbjct: 55  TVLMAVPLFVFMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGT--LLAASTGVV 112

Query: 313 AADMAAIAPVLLPEMEKRGADRGELLALLAATGAQTETIPPSLVLITIGSVTGVSIAALF 372
            A + A+  + LP M K   D+G     + A+G   + IPPS+VLI +G V GV +  LF
Sbjct: 113 GASVVAMGLISLPVMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLGVPVGDLF 172

Query: 373 AGGLMPALVVGALLCCVVWLRSR---------KDDLSGVRRASFGEIAKALVVALPAIAL 423
              L P L++ A     + + ++         + D    RR    E+ KAL   +P +AL
Sbjct: 173 QAALWPGLMLVAAYIIYILIYAKLNPQAAMPIEPDADLSRRQ---EVVKALKAVIPPLAL 229

Query: 424 PFIIRAAVIEGVATATEVSTIGIAYAVLAGLLIYRRFDWRRLYPMLVDTAALSGAILLII 483
             ++  ++  GVAT TE + +G A A+L   L Y +F W  +Y    +T  ++  +  I+
Sbjct: 230 IVVVLGSIFAGVATPTESAALGGAGAILLA-LAYGQFSWSMVYDASKETVKVTAMVFAIL 288

Query: 484 GAATGMAWALTQSGFSAALAHMMTSLPGGAVGFMLVSLVAFIVLGSLLEGIPAIVLFGPL 543
             AT  + A T +G    +   M +LPG   GF++V+++  ++LG  ++ +    +  P+
Sbjct: 289 LGATAFSMAFTYTGGDELVEEWMMNLPGDKWGFLIVTMLVILILGFFIDFVEICFIIVPI 348

Query: 544 LFPIARQVGVNEVHYSMVVILAMGIGLFAPPFGVGYYAASAIS 586
           L P+A  + V+   +++++ + +      PPFG   +    ++
Sbjct: 349 LAPVAVLMDVDMTWFAILIAMNLQTSFLTPPFGFSLFYLKGVA 391