Pairwise Alignments

Query, 176 a.a., Transcription termination/antitermination protein NusG from Xanthobacter sp. DMC5

Subject, 177 a.a., transcription termination/antitermination factor NusG from Pseudomonas stutzeri RCH2

 Score =  214 bits (544), Expect = 8e-61
 Identities = 103/177 (58%), Positives = 139/177 (78%), Gaps = 1/177 (0%)

Query: 1   MAKRWYIVHAYSNFEKKVADSIREQADQRGLTDLFEQILVPTEKVVEVRRGRKVDTERKF 60
           MAKRWY+VHAYS +EK V  S+ E+    G+ D F +ILVPTE+VVE+R G+K  +ERKF
Sbjct: 1   MAKRWYVVHAYSGYEKHVMRSLVERVKLAGMEDEFGEILVPTEEVVEMRNGQKRKSERKF 60

Query: 61  FPGYVLVKMDLTDEAFHLIKNTPKVTGFLGAD-NKPMPISESEAMRILQQVQEGIERPKP 119
           FPGYVLV+M++ +  +HL+K+TP+V GF+G   +KP PI++ EA  IL++V +G ++PKP
Sbjct: 61  FPGYVLVQMEMNEGTWHLVKDTPRVMGFIGGTADKPAPITDKEAEAILRRVADGSDKPKP 120

Query: 120 SISYEVGETVKVSDGPFASFNGIVEEVDDSRSRLKVAVSIFGRATPVELEFGQVEKV 176
              +E GE V+V+DGPFA FNG+VEEV+  +SR++VAV IFGR+TPVELEF QVEKV
Sbjct: 121 KTLFEPGEVVRVADGPFADFNGVVEEVNYEKSRIQVAVLIFGRSTPVELEFSQVEKV 177