Pairwise Alignments

Query, 176 a.a., Transcription termination/antitermination protein NusG from Xanthobacter sp. DMC5

Subject, 205 a.a., transcription antitermination protein NusG from Synechococcus elongatus PCC 7942

 Score =  133 bits (335), Expect = 2e-36
 Identities = 73/184 (39%), Positives = 105/184 (57%), Gaps = 14/184 (7%)

Query: 4   RWYIVHAYSNFEKKVADSIREQADQRGLTDLFEQILVPTEKVVEVRR-GRKVDTERKFFP 62
           RWY V   S  EK+V  ++ ++       +   Q+ +P   +V++++ G +   E K FP
Sbjct: 22  RWYAVQVASGCEKRVKATLEQRVQTLDAANRILQVEIPETPIVKLKKDGSRQSAEEKVFP 81

Query: 63  GYVLVKMDLTDEAFHLIKNTPKVTGFLGADNK-----------PMPISESEAMRILQQVQ 111
           GYVLV+M L D+A+ +++NTP V  F+GA+ K           PMP+S  E  RI ++ Q
Sbjct: 82  GYVLVRMILDDDAWQIVRNTPHVINFVGAEQKRPYGRGRGHVKPMPLSPGEVGRIFKRAQ 141

Query: 112 EGIERPKPSISYEVGETVKVSDGPFASFNGIVEEVDDSRSRLKVAVSIFGRATPVELEFG 171
           E  ++P   I    G+ + V  GPF  F G V EV   RS+LK  +SIFGR TPVELEF 
Sbjct: 142 E--QKPTVKIDLAEGDQILVLSGPFKDFEGTVIEVSPERSKLKALLSIFGRDTPVELEFN 199

Query: 172 QVEK 175
           QV+K
Sbjct: 200 QVQK 203