Pairwise Alignments

Query, 176 a.a., Transcription termination/antitermination protein NusG from Xanthobacter sp. DMC5

Subject, 183 a.a., transcription antitermination protein NusG (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  192 bits (487), Expect = 4e-54
 Identities = 91/174 (52%), Positives = 129/174 (74%), Gaps = 1/174 (0%)

Query: 3   KRWYIVHAYSNFEKKVADSIREQADQRGLTDLFEQILVPTEKVVEVRRGRKVDTERKFFP 62
           KRWY+V A+S +E +V  S+ E     G+   F ++LVPTE+V+E+R G++  +ERKFFP
Sbjct: 9   KRWYVVQAFSGYEGRVCKSLIEYIKMHGMEQYFGEVLVPTEEVIEMRAGQRRKSERKFFP 68

Query: 63  GYVLVKMDLTDEAFHLIKNTPKVTGFL-GADNKPMPISESEAMRILQQVQEGIERPKPSI 121
           GYVLV+M++ D+++HL+K+ P+V GF+ G  ++P PIS+ EA  IL+++QE    P   +
Sbjct: 69  GYVLVQMEMNDDSWHLVKSIPRVLGFIGGTSDRPAPISDREADAILRRLQETTASPTHRV 128

Query: 122 SYEVGETVKVSDGPFASFNGIVEEVDDSRSRLKVAVSIFGRATPVELEFGQVEK 175
            +E GE V+V DGPFA FNG VEEVD  +SR+KV+V IFGR+TPVEL+F QVEK
Sbjct: 129 IFEPGEVVRVCDGPFADFNGTVEEVDYDKSRVKVSVMIFGRSTPVELDFSQVEK 182