Pairwise Alignments

Query, 399 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 357 a.a., inner-membrane translocator (RefSeq) from Shewanella loihica PV-4

 Score =  120 bits (302), Expect = 5e-32
 Identities = 92/329 (27%), Positives = 152/329 (46%), Gaps = 37/329 (11%)

Query: 81  TVNLTAALSI-LAIAAALREEHYTLLMMATVALFATAAAGLTLQMAFAGVPNFAGAAFFA 139
           T+ L   L I LA AA L  + Y L +   ++    AA GL + + F G  +    AFF 
Sbjct: 27  TIRLVTCLVIALACAAPLVLDGYFLTLFIQISYLGIAALGLNILVGFTGQISLGHGAFFG 86

Query: 140 VGAYVAALLGHT-GIPHLLVLLIAGLAAAVLGLVLLLPVLRTRGHYAALVTIAFGLLLRA 198
            GA+ +A L  +  IP +  + +AG     +G++  +P  R +G Y A+ T+A   +++ 
Sbjct: 87  FGAFASAWLNTSFNIPVVFCIPLAGFLTMGVGMMFGMPAARIKGLYLAIATLAAQFIIQD 146

Query: 199 FL-EVNDVLGGPQGMKVKSFSLFGLDFSRVTEIGPYDVSFYLPYALASCALFALAFFLVR 257
           F        GG  G      SLFG DF         D+SFY        ALFAL F  + 
Sbjct: 147 FFGRAEWFSGGSSGAMAAPVSLFGFDFDT-------DMSFYF------IALFALVFMYIW 193

Query: 258 --RLETSFVGVALDAVRSDEVAASVFGLSIARWKATAFLLGNAMIGVAGALYGMMNGFVN 315
              L  S  G A  AVR   ++A + G+ + +++  +F + +   G+ GALY    G+V+
Sbjct: 194 GCNLMRSRDGRAFVAVRDHYLSAEIMGVKLNKYRLLSFGISSFYAGIGGALYAHYLGYVS 253

Query: 316 PNSANFGDSLIMLSILVLGGLGNLWGAVVAAVVILVIPEKLQ------------------ 357
                   S+  L+++++GGLG++ G ++  V ++++PE L+                  
Sbjct: 254 SEGFTILMSIQFLAMVIIGGLGSIKGTLMGVVFMVLLPEVLEGMVGLMKYTDYGNLPMVT 313

Query: 358 -AIQEFRLIIFALLVIAILRFRPSGLMPR 385
             +   + +   L++I  L F P GL  R
Sbjct: 314 DGLAYIKEMAIGLVIILFLIFEPEGLAHR 342