Pairwise Alignments

Query, 342 a.a., Riboflavin-binding protein RibY from Xanthobacter sp. DMC5

Subject, 344 a.a., periplasmic binding protein from Sinorhizobium meliloti 1021

 Score = 56.6 bits (135), Expect = 9e-13
 Identities = 74/322 (22%), Positives = 128/322 (39%), Gaps = 25/322 (7%)

Query: 7   SRRTFATHLLSGAFALGLATASTLPAAAQASKTPDKAVLMLNWYVYGEHAPFIL----GL 62
           S R     LL  A AL +   + L  A+     PD   + +     G H  FIL     L
Sbjct: 5   SIRPLRRTLLKLALALSILPIAGLAPASAGEAKPD--AIRIGSTAPG-HLKFILYRHKKL 61

Query: 63  KKGYYAEEGIDLDIQEGRGSAVTIQAVGAGTATFGLADIGVMIKAVAKGAPVKTIGVL-- 120
            +  +++EGI +++    G +    A+G+G   F        ++  A GA VK IG+   
Sbjct: 62  LEDEFSKEGIKIELTTFDGGSAATVALGSGALDFTYIGNNPSLRLAATGADVKLIGLSSW 121

Query: 121 -LQRTPGAVVAPEGKINGPKDLPGKTIMFTPGDAVTPIWPLYLKKLGIPEGAVKMVAADA 179
                   VV P+  I   +DL GK + +  G      +   LK  G+  G V+ +    
Sbjct: 122 NRSNETQIVVKPDSPIRKIEDLKGKKVAYLSGTVRHSTFAKALKAAGLSIGDVESLNLGI 181

Query: 180 QAKLNAVVNNQADGLIGFTTEQGARLPDIMNKPVTMLRYTDAGVN-----LVSLGIVANT 234
           ++   A+     D ++    E    +  ++ +    + + DAGV+      V   I  N 
Sbjct: 182 ESSGPALARGDVDAIV----ESTGPVQKLVEEGQARVIF-DAGVSGSPEWAVPHLISVNG 236

Query: 235 DTLTKRADMVKRFMRATTRAVEEAEKNPKAAIDILMEAYPKIGLPDAQLRSLQYSQALYR 294
           D   K   +V R +     A   A+ NP+  I I ++   + G  D  +R+   +   Y+
Sbjct: 237 DFARKYPQIVARLLAVDVAAARWADANPEETIAIFVK---ETGNSDMAVRATYPNGKFYQ 293

Query: 295 ASD--DKSTRPFRMNPALMDES 314
             +  D + R  +   A M ++
Sbjct: 294 DPEITDAAVRALQGEEAFMADA 315