Pairwise Alignments

Query, 770 a.a., Sensor histidine kinase RcsC from Xanthobacter sp. DMC5

Subject, 1026 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  169 bits (429), Expect = 5e-46
 Identities = 136/426 (31%), Positives = 206/426 (48%), Gaps = 42/426 (9%)

Query: 346 IGIAMDVTEAQRMAERTVTADMRL-RDAIESISEAFVLWDSQNRLVLCNSKFQSLHELPD 404
           I I  D+T A+++AE  +   +   R  ++++       D+Q R    N  F     +  
Sbjct: 257 IAIRTDIT-ARKLAEARLDEQLHFSRQVLDTLPVPLYFKDTQGRYQGFNKAFADFFGI-- 313

Query: 405 ETIVAGTPFDTIASVGRHPVTRTPLKPEDKPEEGSRAFEAQLSNGRWLKIAERRTKDGGY 464
                    +    +GRH   R  L PE   +  +R  E     GR     E  T  G  
Sbjct: 314 ---------EPSLWIGRH--VRDLLPPELAEQHVARDEEVFARGGRQSYEIELITPAGAR 362

Query: 465 VSVGTDITTMKRHEERLMDNEKRLMALVADLRKSQQTLEHQAQQLAELAEKYSEERNKAE 524
                +   + R +  +    + L+  + D+ + ++    +A+ L          +  AE
Sbjct: 363 YDTLYNKAALTRPDGSV----RGLVGTIMDISERKRW---EAEIL--------RAKEAAE 407

Query: 525 DANRAKSEFLANMSHELRTPLNAIIGFSEIMESGMFGPLGSAKYAEYCSDIKGSGTYLLD 584
           +ANRAKS+FLANMSHE+RTP+N +IG +E+          + +  +Y   ++ S   LL 
Sbjct: 408 NANRAKSDFLANMSHEIRTPMNGVIGMTELALDTEL----TEEQRDYLEAVQMSANALLS 463

Query: 585 VINDILDMSKIEAGRMQLEVEDVALGEIIADAMRVTAVNGDEKGVAMTMEAADNLV--IK 642
           +I+DILD SKIEAGR+ +E+    L ++ ADA+R  AV  D+KG+ +       +   + 
Sbjct: 464 IIDDILDFSKIEAGRLDVELIPFDLEKVCADALRTVAVRADQKGLELLARRGPGVPRRLL 523

Query: 643 GDRRALKQILLNLLSNAVKFTPEGG-RIAVKARVNGAAAVI---AIEDTGIGIAKGALAR 698
           GD   L+QILLNLL NA+KFT  G   +AV+    GAA  +    + DTGIGIA      
Sbjct: 524 GDPGRLRQILLNLLGNAIKFTERGEIEVAVELAEPGAAGQVLYFCVSDTGIGIAPEKQEH 583

Query: 699 IGRPFEQVESQFTKTHKGSGLGLAIAKSLVELHGGAMRIRSIEGSGTTVF--VRLPVDGR 756
           I   F Q +S  T+   G+GLGL I   L EL GG + + S+ G G+     ++LP DG 
Sbjct: 584 IFEAFAQEDSSTTRRFGGTGLGLTICSRLCELMGGRIWVDSVPGQGSAFHFTLQLPTDGA 643

Query: 757 AANSNE 762
           AA   E
Sbjct: 644 AAPEPE 649