Pairwise Alignments

Query, 770 a.a., Sensor histidine kinase RcsC from Xanthobacter sp. DMC5

Subject, 1689 a.a., sensory transduction histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  144 bits (364), Expect = 3e-38
 Identities = 90/237 (37%), Positives = 136/237 (57%), Gaps = 12/237 (5%)

Query: 522  KAEDANRAKSEFLANMSHELRTPLNAIIGFSEI-MESGMFGPLGSAKYAEYCSDIKGSGT 580
            +A+ ANRAKS+FLANMSHE+RTP+NAIIG S + +++ +     + K  +Y + +  +  
Sbjct: 948  QADAANRAKSDFLANMSHEIRTPMNAIIGMSYLALQTDL-----AEKRKDYIAKVHQAAG 1002

Query: 581  YLLDVINDILDMSKIEAGRMQLEVEDVALGEIIADAMRVTAVNGDEKGVAMTMEAADNL- 639
             LL++INDILD SKIEA ++ +E  +  L E++     V     +E  + +  + A +  
Sbjct: 1003 SLLNIINDILDFSKIEANKLTVEHIEFDLDEVLTQLNNVIGFKVEENSMRLIYDIATDCP 1062

Query: 640  -VIKGDRRALKQILLNLLSNAVKFTPEGGRIAVKARV----NGAAAVIAIEDTGIGIAKG 694
                GD + L QILLN  +NAVKF+P+G  I +  +      GA     + D GIGI   
Sbjct: 1063 RYFIGDPQRLGQILLNYCNNAVKFSPKGSDILLSCQAELDKQGATLTFCVADDGIGIPLD 1122

Query: 695  ALARIGRPFEQVESQFTKTHKGSGLGLAIAKSLVELHGGAMRIRSIEGSGTTVFVRL 751
              AR+   FEQ ++  ++ + G+GLGLAI K L EL  G +   S  G G+  ++RL
Sbjct: 1123 KQARLFHSFEQGDTSTSRKYGGTGLGLAICKRLSELMQGEVWCESELGQGSRFYLRL 1179



 Score = 35.8 bits (81), Expect = 2e-05
 Identities = 23/106 (21%), Positives = 49/106 (46%), Gaps = 2/106 (1%)

Query: 347 GIAMDVTEAQRMAERTVTADMRLRDAIESISEAFVLWDSQNRLVLCNSKFQSLHELPDET 406
           G+  ++    RMA +  ++  +     +S+ +A V+ D +  +  CN+  Q+L  + D+T
Sbjct: 682 GLKRELLRRSRMAAQLESSMNKFHALFDSVMDACVIIDKRGVIKECNAALQTLLGVEDKT 741

Query: 407 IVAGTPFDT--IASVGRHPVTRTPLKPEDKPEEGSRAFEAQLSNGR 450
            + GT      +A        +     ED  ++G   FEA +++ +
Sbjct: 742 ALVGTSLTQFHLADTFMGSAVQIAQSVEDVLKQGLLKFEADITDSQ 787