Pairwise Alignments

Query, 449 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 366 a.a., RND efflux membrane fusion protein from Pseudomonas fluorescens FW300-N2E2

 Score = 80.5 bits (197), Expect = 8e-20
 Identities = 93/361 (25%), Positives = 150/361 (41%), Gaps = 35/361 (9%)

Query: 82  EAARAAALSVTVVKPRPDTLTDTLLVTGSIKPREEIEVGPEIEGYRLMEILVEAGDRVQK 141
           E    A     VVKP+P          G ++ R E ++   I G ++   LVE G RV+ 
Sbjct: 25  EPVPVAVRPAMVVKPQPSVQAMDSY-PGEVRARFEPDLAFRIGG-KVSRRLVEEGQRVKA 82

Query: 142 GQVLARLSRDVLETQLAQNTASAAKARAAIAQQQAALDQAIAQETEATAAVERTRQLSKT 201
            Q LA L  + +  QL         ARA +A  +A L+   A+        +R + L + 
Sbjct: 83  NQPLAELDPEDVRLQL-------EAARAQVAAAEANLNLVRAER-------DRYKTLMER 128

Query: 202 GTSSQEQLEQRERAAKVATAQVAAARETLIAAQAEAVFVKAQRDEIEVKLKRTDVRAPAS 261
              S+ Q +  E   +  TA++                +KA+ D    +   + +RAP  
Sbjct: 129 QMVSRSQYDNAENLYRSGTARLKQ--------------IKAEFDVANNQASYSILRAPQD 174

Query: 262 GLVLSREAKLGAIALSTRAAPLFRIAEDGAMDLDADVPEGAMPRMKDGLSVQV-VPAGFD 320
           G+V  R  ++G +   +    +F +A DG  ++   +PE    R K G  V V + +  D
Sbjct: 175 GVVARRSVEVGQVV--SAGQTVFTLATDGEREVLISLPEQGFGRFKIGQPVSVELWSQPD 232

Query: 321 EPIGGKVRLVSAEVDRASRLGKVKIAL-PDDPRLKSGAYGRAVIALGEVKGLSLPQSAVM 379
           +   G++R +S   D  SR    ++A    +   + G   R  I   +   LS+P SA+ 
Sbjct: 233 QRFSGRIRELSPAADPKSRTFAARVAFTAGNVPAELGQSARVFIQTADKVPLSVPLSALT 292

Query: 380 FDAEGAYVLTV-TDGIVGIQRITPGLKKDGRILVTEGLSADADVVARAGSFLRDGDRVTP 438
            +    YV  V  +  +    +  G   +  + V EGL  D  VVA     L DG +V P
Sbjct: 293 AENGATYVWVVNANNTLKKVPVRVGAFGEKTVPVLEGLGPDDWVVAAGVHVLLDGQQVRP 352

Query: 439 V 439
           V
Sbjct: 353 V 353