Pairwise Alignments

Query, 449 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 352 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score = 75.9 bits (185), Expect = 2e-18
 Identities = 82/363 (22%), Positives = 152/363 (41%), Gaps = 48/363 (13%)

Query: 80  AAEAARAAALSVTVVKPRPDTLTDTLLVTGSIKPREEIEVGPEIEGYRLMEILVEAGDRV 139
           A E  +  A+SV     +   ++ +L V G +K  + +++  E+ G ++  I V+A  +V
Sbjct: 23  AKEPNQPPAISVVTESVQSQQISQSLSVVGKLKAEQSVDIAAEVAG-KVDMIAVQANQQV 81

Query: 140 QKGQVLARLSRDVLETQLAQNTASAAKARAAIAQQQAALDQAIAQETEATAAVERTRQLS 199
           +KGQ+L +L  D              KA+AA+ + +A L      + E     E  R L 
Sbjct: 82  KKGQILIKLDDD--------------KAQAALVEAKAYL------QDEQRKLTEYERLLK 121

Query: 200 KTGTSSQEQLEQRERAAKVATAQVAAARETLIAAQAEAVFVKAQRDEIEVKLKRTDVRAP 259
           +   +  E   QR        A+V   +  L AAQA               L    + AP
Sbjct: 122 RNAITPTEIDAQR--------ARVEIGQARLNAAQA--------------NLADLHITAP 159

Query: 260 ASGLVLSREAKLGAIALSTRAAPLFRIAEDGAMDLDADVPEGAMPRMKDGLSVQVVPAGF 319
             G V   +   G     +  + L  +     M LD  +PE  +P++  G+ VQ     +
Sbjct: 160 FDGTVGFIDFSRGKWV--SAGSELLTLDNLSLMRLDLQIPERYLPQLSKGMKVQGSSEAW 217

Query: 320 -DEPIGGKVRLVSAEVDRASRLGKVKIALPD-DPRLKSGAYGRAVIALGEVKGLSLPQSA 377
            +    G V  V + +++ +   +V++  P+ D RLK G    A I    +    +P  A
Sbjct: 218 PNVQFEGSVVAVDSRINQETLNLRVRVHFPNPDQRLKPGMLMSARIHFPAISAPIIPVQA 277

Query: 378 VMFDAEGAYVLTV-TDGIVGIQRITPGLKKDGRILVTEGLSADADVVARAGSFLRDGDRV 436
           + +     +V  +  D +   + ++ G + + ++++ +GL     +V +    +RD  RV
Sbjct: 278 LEYSGTKRFVYVIGEDNVAKRREVSLGARVENQVVIEKGLQIGEKIVVQGIVNMRDNARV 337

Query: 437 TPV 439
           + V
Sbjct: 338 SEV 340