Pairwise Alignments

Query, 449 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 398 a.a., RND family efflux transporter, MFP subunit from Dechlorosoma suillum PS

 Score = 96.7 bits (239), Expect = 1e-24
 Identities = 109/406 (26%), Positives = 165/406 (40%), Gaps = 57/406 (14%)

Query: 45  RPARFAASRLAVSAFAVL------AAGALAAPPATAAEPAKAAEA-ARAAALSVTVVKPR 97
           R  R+A   LA +    L      A  A   P A AA  AKA  A A AA L V      
Sbjct: 4   RKHRYAVIALAAAGIVGLGWVAYNANRAPGGPQAPAAAGAKAGGAGAPAAPLPVETALAA 63

Query: 98  PDTLTDTLLVTGSIKPREEIEVGPEIEGYRLMEILVEAGDRVQKGQVLARLSRDVLETQL 157
           P ++TD     G+++  E + + PE  G R+  I  + G  V KG VL  L         
Sbjct: 64  PQSITDEAAAVGTLRSNESVVLRPETAG-RIASIGFKDGVPVAKGTVLVALD-------- 114

Query: 158 AQNTASAAKARAAIAQQQAALDQAIAQETEATAAVERTRQLSKTGTSSQEQLEQRERAAK 217
                         A Q+A L QA A    A    +RT +L      SQ+ L+      K
Sbjct: 115 -------------AATQEAELQQAKANHALAVTNFKRTEELLAKKFISQQSLDTTAANLK 161

Query: 218 VATAQVAAARETLIAAQAEAVFVKAQRDEIEVKLKRTDVRAPASGLVLSREAKLGAIALS 277
           V  A VA A                     E KL +T +RAP +G+V  RE  +G     
Sbjct: 162 VQEAAVALA---------------------EAKLAKTRIRAPFAGVVGIREVSVGDYV-- 198

Query: 278 TRAAPLFRIAEDGAMDLDADVPEGAMPRMKDGLSVQV-VPAGFDEPIGGKVRLVSAEVDR 336
              A L  + +   + LD  +PE  + R++ G +V+V V A  ++     +  V   VD 
Sbjct: 199 KEGADLINLEDIRTLKLDFRLPELYLSRLQKGQAVEVSVDALPNQAFKAVLDAVDPLVDA 258

Query: 337 ASRLGKVKIALPDDPRLK--SGAYGRAVIALGEVKG-LSLPQSAVMFDAEGAYVLTVTDG 393
             R   ++  L D+P LK   G + R  +  G   G L +P+ A++       V  + +G
Sbjct: 259 NGRAISLRARL-DNPELKLRPGMFARVRLLFGNRDGVLMIPEQAIVSGGGKQTVFRIEEG 317

Query: 394 IVGIQRITPGLKKDGRILVTEGLSADADVVARAGSFLRDGDRVTPV 439
                 +  GL+++ ++ +  GL+A   ++      ++DG  V  V
Sbjct: 318 KAKKVEVKTGLRRNAQVEILSGLAAGDRIITAGQLKVQDGSPVKAV 363